GitHub
btc-spatial-pipelines
Nextflow spatial pipelines (for Spatial Transcriptomics, IMC, etc.)
atavide_lite
A simpler version of atavide that relies only on slurm or PBS scripts. Some of the settings are specific for our compute resources
diaper
De Data-InfrAstructure for ParEnts and ChildRen, DIAPER is geschikt voor onderzoek rondom geboortezorg, zwangerschap en bevalling, en de eerste jaren van het leven. Het RIVM gebruikt DIAPER voor verschillende monitors in de geboortezorg.
electrogenomics-group.github.io
“Electrogenomics” group was established in 2015 by Professors Munroe, Lambiase and Tinker. This is a collaboration between the William Harvey Research Centre at QMUL and UCL’s Institute of Cardiovascular Science. We joined forces in a broad scale attempt to unravel the electrical and genetic causes of cardiovascular mortality.
https://github.com/ivoschulthess/protonnmr_dressedstates
Repository containing the data and the analysis for the publication of the dressed spin states measurements using the Proton NMR apparatus.
pta-bergsas-presentation
Presentation for BergSAS course: “Digital Methods and Instruments of the ZGAW” (SS 2025)
https://github.com/lromul/kaggle-planet-amazon
Solution for Kaggle competition "Planet: Understanding the Amazon from Space"
gitprojecthealth
A Mining Software Repository and Ticket management Platform tool, in Pharo
kinesis
shiny Applications for the tesselle R Packages - :exclamation: This is a read-only mirror from https://codeberg.org/tesselle/kinesis
stars-reproduce-huang-2019
Assessing the computational reproducibility of Huang et al. 2019 as part of STARS.
stars-reproduce-shoaib-2022
Assessing the computational reproducibility of Shoaib and Ramamohan 2022 as part of STARS.
npp-product-comparison
MATLAB scripts to identify the optimal net primary production (NPP) model by comparing with in situ 14C data from time-series stations.
https://github.com/dcan-labs/abcd-t1reg
A citizen science game for ABCD Study Quality Control of anatomical image registration.
-pmv-ads-2023-1-e1-proj-web-t16-carteira-investimento
pmv-ads-2023-1-e1-proj-web-t16-pmvads2023-1-e1-web-t16-t2carteirainv created by GitHub Classroom
linux-system-information
ℹ️ Outputs system information on Linux, including distribution, computer model, processor, CPU sockets/cores/threads, total memory and swap space, disk space and graphics processor
scientific-inkscape
Scientific Inkscape: Inkscape extensions for figure resizing and editing
cedskmeans
K-means clustering for differentially private power grid advanced metering infrastructure (AMI) synthetic customer data
dedup-asreview
Deduplication challenge for the AI-Aided Systematic Reviewing summer school course at Utrecht University.
pygenray
A fully python implementation of ray tracing for underwater acoustics
stats-strided-dmeanlipw
Calculate the arithmetic mean of a double-precision floating-point strided array using a one-pass trial mean algorithm with pairwise summation.
bioclip
This is the repository for the BioCLIP model and the TreeOfLife-10M dataset [CVPR'24 Oral, Best Student Paper].
symbolfit
Automatic parametric modeling with symbolic regression [Comput Softw Big Sci 9, 12 (2025)]
springytools
A set of Go based command line tools for working with LibGuides export XML
nekstab
An open source toolbox based on Krylov methods for highly parallel global linear stability analysis of incompressible flow problems for Nek5000.
stats-array-variancepn
Calculate the variance of an array using a two-pass algorithm.
stats-array-variancech
Calculate the variance of an array using a one-pass trial mean algorithm.
stats-strided-dvariancewd
Calculate the variance of a double-precision floating-point strided array using Welford's algorithm.
stats-strided-dvariancech
Calculate the variance of a double-precision floating-point strided array using a one-pass trial mean algorithm.
sprint-content
Opensciency - A core open science curriculum by and for the research community.
zarp-cli
A user-friendly command-line interface for the ZARP RNA-seq analysis workflow
scikit-surgeryfredmatplotlib
This is the legacy Matplotlib frontend for SciKIt-SurgeryFRED. You should try this instead: https://github.com/UCL/scikit-surgeryfred
powersystemdynamics_quantum
This repository includes the code for modeling power system dynamics with quantum computing which is presented in the paper ...
opencv_conda_build_on_orin
Script for building OpenCV from source in a conda envrionment on the NVIDIA Jetson Orin.
matlab-project-template
A template repository for promoting reproducible research using MATLAB code
pytorch_gum_uncertainty_propagation
This code base is intended to serve as a starting point for interested researchers or practitioners to extend or apply the uncertainty propagation portion of the author's Master's thesis " GUM-compliant neural-network robustness verification".
yolov8detach
Stroma Challange via Yolov8 with freeze support. Original branch with freeze support in website
benchmarkrecovery
Benchmarking recovery indicators from remote sensing time series
cleaned-swansf-dataset
The SWAN-SF dataset is now fully preprocessed, optimized, and ready for binary classification tasks. Our team is excited to release the enhanced version of the SWAN-SF dataset across all five partitions.
pmv-ads-2023-1-e1-proj-web-t1-cidadania-brasil
Um canal de comunicação efetivo onde os cidadãos podem se reunir e fazer suas reivindicações, contribuindo para o combate à má gestão pública.
myo_gait
The goal of this project is to provide an accessible platform for developing myoelectric driven gait phases recognition schemes. The code is designed to be modular, allowing users to easily test different feature sets, learning models, and postprocessors to allow researchers to contribute in further boosting the state-of-art performances.
blind-docking-qvina-w-gamd-zika-ns2bns3
Blind Docking and GAMD simulations for the non-competive inhibitors of the ZIKA-NS2BNS3 protease
nfhs_abdominalobesity
This repository contains code that attempts to replicate the analysis on abdominal obesity using the NFHS 5 dataset. [See README.md for link to original article]
ttu_lng_ss
Markdown files to produce a template scientific summary of an analysis of longitudinal data performed with the TTU R package
