GitHub
freeenergynetworkanalysis
Software for automated processing of alchemical free energy calculations
tdmchops
Collection of code that chops in time chunks of NTCAP (iq.tdms) data in order to perform high-precision analysis of Schottky signals for mass-and lifetime measurements of ringed ions
https://github.com/jcallinan/interactivedatastructuresjs
Interactive Data Structures - examples of common data structures in JavaScript
bionetworks_estimations
Data and scripts for "Testing biological network motif significance with exponential random graph models"
avail-optimism
Avail DA's integration with optimism's optimistic rollup sdk op-stack (modular blockchain)
covid-19.spb
The datasets stored in this repository are essential to reproduce results in Barchuk A. et al. (2021) COVID-19 pandemic in Saint Petersburg, Russia: combining surveillance and population-based serological study data in May, 2020 - April, 2021. medRxiv 2021.07.31.21261428; doi : 10.1101/2021.07.31.21261428v1
vcnn4pude
VCNN4PuDe is a framework for identifying the persons who engage in pushing within videos of crowds
https://github.com/jcallinan/stickersmash2025
Expo tutorial from https://docs.expo.dev/tutorial/create-your-first-app/
temporal-link-prediction
Code used in `Supervised temporal link prediction in large-scale real-world networks'
networks-of-roman-eleusis
A Digital Scholarship Tool for Studying Ancient Epigraphy
https://github.com/jcallinan/oopnodepython
An OOP example using Node.js and Python with Flask
dgmf
This repository holds the Dependency Graph Mining Framework (DGMF). DGMF offers fast, comparable depedency graph generation for multiple repositories.
fedsa_public
Field Effect Detection by Spectral Analysis, FEDSA, public repository.
ieeh-power-system-data-model
A hierarchical data model for the description of electrical power systems.
differential_alignment_shiny_app
This is a Shiny App for Calculating Differential Alignment
toolbox-continu-inzicht
Python toolbox voor waterkeringbeheerders om risico's in kaart te brengen.
pyhistology
Python package that uses colorspace-based segmentation to analyze histopathology images.
magnetosphericswcx
Code used to produce the results in a publication on separating out the magnetospheric SWCX X-ray spectral contribution in astrophysical observations of dark fields.
raster-vision
An open source library and framework for deep learning on satellite and aerial imagery.
separating-acute-from-chronic
Repository for code used in the study on separating the acute from the chronic training load.
https://github.com/jcallinan/reactnativeexampleapp
React Native example app that will run with an Android emulator.
galaxy-tools-ibridges
iBridges-based tools for Galaxy to interact with iRODS/YODA
batcancer
Data and analysis of corresponding paper investigating link between cancer - brown fat - cachexia
directed-digital-evolution
Computational model of laboratory directed evolution + experiments.
diagenetic_model_lheureux_2018
Fortran code for the diagenetic model by Ivan L'Heureux 2018 (https://doi.org/10.1155/2018/4968315)
speech_data_ghana_ug
The dataset comprises of 5000 hours speech corpus in Akan, Ewe, Dagbani, Daagare, and Ikposo. Each language includes 1000 hours of audio speech from indigenous speakers of the language. Of which 100 hours is transcribed.
decidingifgenus1curvehasqpoint
MAGMA code to determine if a Genus 1 curve defined over Q has a rational point.
part-iii-essay-meta-learning
Source code for experiments as part of the Cambridge Mathematical Tropis Part III essay on 'Meta-Learning: A PAC-Bayesian Perspective