GitHub
mde-presentation-egu2023
Presentation on the Model Data Explorer at EGU 2023 in Vienna
commonsensevision
Open-world object detection using YOLOv8 + CLIP + LLaVA + GPT-based trait reasoning to detect objects based on intent and scene context.
ml-lifecycle-visualization
Machine learning lifecycle visualization providing a checklist for steps necessary in a machine learning project
voice-based-emotion-recognition-using-ai-and-speech-processing
A deep learning project that detects human emotions from audio using MFCC feature extraction and a neural network classifier. Built using Python and TensorFlow, this tool leverages speech signal processing to predict emotions like happy, angry, or sad, helping machines better understand human sentiment.
stringerrunouttopopt
Code and results for the manuscript "Topology optimisation methodology for robust design of large composite structures"
dh_yvonne_n
An incomplete collection of Christopher Moore books, from my own library.
optitrack_broadcast
(FSC lab) calculate rigid-body velocity based on position stream from vrpn
candipore
Candida auris Variant calling workflow for both long and short reads (+parabricks)
gov.nasa.pds:mi-label
Metadata Injector for PDS Labels (MILabel) provides a command-line interface for generating PDS4 Labels using a user provided PDS4 XML template and input (source) data products.
rad_assembler
Nextflow pipeline for Reference Assisted De novo assembling whole genome shotgun sequenced viruses.
noveltree
NovelTree is a highly parallelized and computationally efficient phylogenomic workflow that infers gene families, gene family trees, species trees, and gene family evolutionary history.
ldtr
R package to implement the Landscape Dynamic Typology (LDT) method developed by Machado et al. 2018. The main purpose is to assess land use / land cover changes between several moments.
https://github.com/dincalcilab/nf-core-modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
https://github.com/dincalcilab/sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
awesome-engineer-design
A curated list of awesome engineer design papers, including airfoil design, 3D print, CAD design
https://github.com/dincalcilab/checkqc
CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria
pairgenomealign_windowmask
New genome masking pipeline of pairwise genome alignment
assignments-3-and-later-zaransage
assignments-3-and-later-zaransage created by GitHub Classroom
mysql-mcp-server
A comprehensive Model Context Protocol (MCP) server for MySQL databases with 200+ tools for advanced database management, diagnostics, performance analysis, security auditing, and AI-powered database interactions.
https://github.com/dincalcilab/samurai-test-data
Public data files for SAMURAI tests
2025-05-19-tudelft
SWC repository. Location: University of Twente .Date: May 19-22, 2025
twinpals-modul-1
A custom made Geant4 simulation for a Positron Annihilation Lifetime Spectroscopy to generate data streams with individual event information.
nonnewtoflows
An open-source MATLAB code to analyse non-Newtonian inelastic fluids flowing in slightly tapered axisymmetric pipes.
trabalhointerdisciplinarigrejavidanova
Este repositório contém o terceiro trabalho interdisciplinar realizado no curso de Engenharia de Software, neste trabalho atendemos a necessidade de um cliente real, que necessitava de um software que o ajudasse na organização de sua Igreja
svm_python
The Support Vector Machine (SVM) is a powerful supervised learning algorithm used for classification and regression tasks. It finds the optimal hyperplane that separates data into classes with the maximum margin, making it effective for high-dimensional data and nonlinear boundaries.
rbf_bd_vba
Computational Application of Radial Basis Function Neural Networks (RBFNN) I employ radial basis functions in hidden layers, efficiently modeling complex nonlinear relationships in data. Their unique architecture enables accurate function approximation, classification, and regression, making them versatile and effective across multiple domains.
orthanc-python
This is a read-only mirror of https://hg.orthanc-server.com/orthanc-python/
rbf_vba
Computational Application of Radial Basis Function Neural Networks (RBFNN) I employ radial basis functions in hidden layers, efficiently modeling complex nonlinear relationships in data. Their unique architecture enables accurate function approximation, classification, and regression, making them versatile and effective across multiple domains.
datasets
Clone of Huggingface's datasets library with torchcodec's cuda accelerated decodec
citationrmd
This repository shows a workflow of how to include references into documents using Zotero citation styles
https://github.com/google-deepmind/spectral_inference_networks
Implementation of Spectral Inference Networks, ICLR 2019
imageomics-guide
Imageomics-focused guide to collaborative work, including GitHub and Hugging Face workflows.
ivonesamplemr
Stata package for one-sample Mendelian randomization / instrumental variable analyses
h2-opt-st-interp-num
Numerical examples of interpolatory necessary H2-optimality conditions for structured linear systems
labelbuddy-annotations
Annotations of academic papers. The papers were likely gathered using pubget, and the annotations made with labelbuddy
polyglot-scholarvault-20250722_175405
Auto-exported from VibeSheet for idea 1256
phosphine-sproj
Contains all of the supplementary data useful for my Senior Project on the spectrum of the Phosphine molecule.
NonparametricVI
Particle-based and nonparametric variational methods for approximate Bayesian inference and Probabilistic Programming
wrfchem-install-script-linux-64bit
Self install tool for the Weather Research Forecasting Model (WRF) CHEM, on 64bit
ipf-sonification-pd
Three different PD scripts for real-time synthesis using the Impulse Pattern Formulation (IPF)
cnd/ddd-maker-bundle
A Symfony bundle that automates the generation of Domain-Driven Design (DDD) code artifacts, including commands, queries, handlers, controllers, API documentation, tests, and more. This bundle provides console commands to quickly scaffold DDD classes for your Symfony projects, following the CQRS (Command Query Responsibility Segregation) pattern.
phyloref
PhyloRef: A Snakemake-Based Workflow for Semi-Automated Reference Library Curation via Phylogenetic Anomaly Detection
pypackit
Cloud-Native Continuous Software Engineering Automation for Python Packages on GitHub
