GitHub
pco-si-2024-1-p3-poo-tpfinal-grupo-6
pco-si-2024-1-p3-poo-tpfinal-grupo-6 created by GitHub Classroom
hpc_submit_scripts
Slurm job scripts to run and analyze molecular dynamics simulations on high performance computers
genomedata
The Genomedata format for storing large-scale functional genomics data.
mdtools
Scripts to prepare and analyze molecular dynamics simulations
pmv-ads-2023-1-e3-proj-mov-t1-dream-mapp
pmv-ads-2023-1-e3-proj-mov-t1-dream-mapp created by GitHub Classroom
iros1231.github.io
Source code website for Laboratory of Intelligent Robots and Systems (IRoS) at the Faculty of Computer Science, Universitas Indonesia.
affirmative-sampling
Reference implementation of the Affirmative Sampling algorithm by Jérémie Lumbroso and Conrado Martínez (2022). 🍀
masc-dataset
Code and data for the MASC Dataset: A Novel Resource for Classifying Mobile Application Screens using Machine Learning.
av2-route-planning
The repository for trying out route planning based on Argoverse 2 High-definition maps.
min-knapsack-with-compactness
Algorithms for the min-Knapsack problem with compactness constraints.
estoque-da-vovo-puc
Trabalho interdisciplinar de aplicações para sustentabilidade
mu-teg-sim
An app to simulate the device physics of micro thermoelectric generators.
deuteron
We use Variational Artificial Neural Networks to solve the nuclear bound state
ogd-monitor
A simple web tool to monitor incoming OpenGameData events on a database server.
lsst_solar_system_plotting_tools
Package for making useful plots from LSST/Rubin Observatory Solar System Data
impartial-multi-task-learning
PyTorch implementation of "Towards Impartial Multi-Task Learning"
homophilic_directed_scalefree_networks
Inequalities in Homophilic Directed ScaleFree Networks
plmg-cc-ti2-2024-1-g28-mindmate
plmg-cc-ti2-2024-1-g28-mindmate created by GitHub Classroom
delphi-rs
Delphi: Asynchronous Approximate Agreement for Distributed Blockchain Oracles
questionnaire-presenter
Questionnaire Presenter - A standalone program to collect questionnaire data made with Unity3D
pmv-ads-2022-2-e2-proj-int-t7-priorizandosaude
pmv-ads-2022-2-e2-proj-int-t7-priorizandosaude created by GitHub Classroom
pmv-ads-2023-1-e3-proj-mov-t7-estocaai
pmv-ads-2023-1-e3-proj-mov-t7-estocaai created by GitHub Classroom
2024-chelicerate-phylogenomics-peptides
Analyzes the outputs of the chelicerate noveltree run and subsequent trait-mapping for association with host detection suppression (phylo-profiling) and predicts peptides from those proteins
upgraded-funicular
Previewing the Workbench version of Sarah's extended Git lesson
reproducible_figures
Tutorial/explainer on why & how to make reproducible figures
plmg-cc-ti2-2024-1-g01-codewizard
plmg-cc-ti2-2024-1-g01-codewizard created by GitHub Classroom
pmv-ads-2022-1-e1-proj-web-t6-grupo_5_facility
pmv-ads-2022-1-e1-proj-web-t6-grupo_5_facility created by GitHub Classroom
keggcharter
A tool for representing genomic potential and transcriptomic expression into KEGG pathways
nostalgia-and-the-desire-for-authenticity
This collection of work combines family archives, original photography, and sculpture. The work is a response to the abstract of the ephemeral contemporary image.
pytams
An implementation of the trajectory-adaptive multilevel splitting (TAMS) method.
pmv-ads-2023-1-e3-proj-mov-t6-agenda-de-uma-barbearia
pmv-ads-2023-1-e3-proj-mov-t6-agenda-de-uma-barbearia created by GitHub Classroom
thermal-demand-response-phd
A collection of programs and workflows used throughout the research project including data cleaning, processing, analysis and outputting using predominantly Python and R.
pix2seq
Simple Implementation of Pix2Seq model for object detection in PyTorch
mmsegmentation-underwater-scenery
Custom version of mmsegmentation to segment underwater scenes
https://github.com/broadinstitute/g2papi
Python Client Library for the G2P Portal API
https://github.com/brucewlee/conference_cheatsheet
publication-related stuff, largely for myself
https://github.com/bryanparthum/usrw_waterquality
Code and data for "Overlooked Benefits of Nutrient Reductions in the Mississippi River Basin"
https://github.com/bueler/mcd-extended
extending the multilevel constraint decomposition method of Tai (2003)
https://github.com/bugratufan/make-silicon
A streamlined toolkit for initializing FPGA and ASIC directories and scripts.
https://github.com/bytedance/pxdesignbench
A Unified Evaluation Suite for Protein Design
https://github.com/bytedance/hammer
An efficient toolkit for training deep models.
https://github.com/byuflowlab/implicitad.jl
Automates steady and unsteady adjoints (general solvers and ODEs respectively). Forward and reverse mode algorithmic differentiation around implicit functions (not propagating AD through), as well as custom rules to allow for mixed-mode AD or calling external (non-AD compatible) functions within an AD chain.
https://github.com/cadet/rdm-example-rectangular-pulse
CADET case study from paper: Analytical solutions and moment analysis of general rate model for linear liquid chromatography” (Shamsul Qamar et al.)
https://github.com/cadet/rdm-example-multi-state-steric-mass-action
CADET case study from paper: Multi-state steric mass action model and case study on complex high loading behavior of mAb on ion exchange tentacle resin (Diedrich et al.)
https://github.com/cafferychen777/awesome-scrna-annotation
A curated list of tools and methods for scRNA-seq cell type annotation
https://github.com/calliope-project/module_road_transport
A module to compute road transport timeseries and yearly values.
https://github.com/caltechlibrary/2018-03-29-r-workshop
Repo for files for 2018-03-29 Data Analysis, Visualization, and Reproducibility with R Notebooks workshop.
https://github.com/cambiotraining/stats-mixed-effects-models
https://github.com/camilogarciabotero/biosimplex.jl
Representing BioSequences as Simplex numerical matrix
https://github.com/captaincodercool/captaincodercool
Welcome to CAPTAINCODERCOOL’s GitHub! Dive into my repository of diverse projects ranging from AI-driven tools to full-stack web applications. Discover code, insights, and innovations crafted to push the boundaries of technology and software development.
https://github.com/carmonalab/genenmf
Methods to discover gene programs on single-cell data
https://github.com/carmonalab/stacas
R package for semi-supervised single-cell data integration
https://github.com/carperai/trlx
A repo for distributed training of language models with Reinforcement Learning via Human Feedback (RLHF)
https://github.com/carv-ics-forth/hpk
HPK allows running Kubernetes applications within HPC by translating deployments to Slurm and Singularity/Apptainer
https://github.com/casus/umod
Urine Microscopy Open Dataset and its validation
https://github.com/catalyst-cooperative/open-grid-emissions
Tools for producing high-quality hourly generation and emissions data for U.S. electric grids
https://github.com/cbg-ethz/oncotreevis
An interactive graphical user interface for visualizing mutation tree cohorts.
https://github.com/cdk/cdkbook
Groovy Cheminformatics with the Chemistry Development Kit
https://github.com/cea-metrocarac/images_alignment
Application to re-align images
