GitHub
known-problems
A collection of well-known problems that occur in passive acoustic monitors.
dutch-word-embeddings
Dutch word embeddings, trained on a large collection of Dutch social media messages and news/blog/forum posts.
datascout
This repo queries and gather data from different resources which can then be used to run bulk automatised annotation of microbial genomes.The different types of data are: OrthoDB and UniProt orthology data; Rfam (non coding Rna data); Transcriptomic data from ENA
webspatialscan
R package for OpenCPU backend to detect and visualize spatio-temporal disease clusters from the web
fantasy-baseball-draft-assistant-malkawi-peoples-pennington-group8
fantasy-baseball-draft-assistant-fantasy-group8 created by GitHub Classroom
opensense_sandbox
Collection of runable examples with software packages for processing opportunistic rainfall sensors
armacell
ARMA cell: a modular and effective approach for neural autoregressive modeling
mcmanamay-etal_2024_natcom
Dynamic urban land extensification is projected to lead to imbalances in the global land-carbon equilibrium
parabricks-genomics-nf
Scalable Nextflow implementation of germline alignment and short variant calling with Parabricks for NCI Gadi HPC.
zeoran
Code used in the paper "Adsorption of carbon dioxide in non-Löwenstein zeolites".
carpetfuzz-fuzzer
CarpetFuzz's fuzzer component. Belongs to CarpetFuzz main repo.
twitter-job-postings
Replication materials for the paper "280 Characters to Employment: Using Twitter to Quantify Job Vacancies"
displace_gui
A Scientific Research Software for Spatial Fisheries and Natural Resource Management
mpg.pure-to-csv
A Jupyter Notebook to convert MPG.PuRe search querys in a simple CSV file.
citsci-spatial-bias
Code for paper: "Assessing and Correcting Neighborhood Socioeconomic Spatial Sampling Biases in Citizen Science Mosquito Data Collection"
com.github.javadev
MAYGEN is an open source chemical structure generator based on the orderly graph generation method.
adaptive-network-defense-on-network-emulator
This project aims to create network emulator with GN3, then we build adaptive defense module on top
plmg-cc-ti2-2024-1-g30-walk-buddy
plmg-cc-ti2-2024-1-walk-buddy created by GitHub Classroom
how-not-to-negotiate
Poster of the experimental internship during my bachelors
finops-focus-superset-pinot
FinOps dashboards using Apache Superset and Apache Pinot with FOCUS datasets
ijcai24-cf_tut
IJCAI-24 Tutorial on Counterfactual Explanations: https://sites.google.com/view/tut-counterfactuals-ijcai24/
user-guided-fuzzer-with-afl
When Grey-box Fuzzing, User can not access the fuzzing process like black box. What if user guides fuzzer for fine-grained fuzzing? This is User-Guided Fuzzer with AFL++
PhytoFit
Shiny app for viewing satellite chla and modelling phytoplankton blooms
lattice_paths
Code for computation regarding k-equivalent lattice paths in combinatorics.
gff2ddbj
This tool will convert GFF3 files into DDBJ annotation files. It was created to work with Braker2 generated GFF files, but should work with any other GFF3 file as well.
crux
Crux is a suite of LLM-empowered summarization and retrieval services for academic activity. Crux is developed by XCCV group of cvpaper.challenge.
a-guide-to-automatically-downloading-ncbi-sra-reads
A Guide to Automatically Downloading NCBI SRA Reads
yolov5customdataset
This repository demonstrates how to use YOLOv5 for object detection on a custom dataset. It includes scripts and instructions for preparing the dataset, training the model, and evaluating its performance.
https://github.com/pietrobarbiero/logic_explained_networks
Logic Explained Networks is a python repository implementing explainable-by-design deep learning models.
eam-potential-using-lammps
This a simulation of lithium melting carried out in LAMMPS a Molecular Dynamics software.
@stdlib/random-strided-discrete-uniform
Fill a strided array with pseudorandom numbers drawn from a discrete uniform distribution.
anionic_clar_fullerene_ilp
This repo contains code to solve the anionic Clar number of fullerenes.
nf-vuegen
nf-core module designed to automate report generation from outputs produced by other modules, subworkflows, or pipelines. VueGen creates reports from bioinformatics outputs, supporting formats like PDF, HTML, DOCX, ODT, PPTX, Reveal.js, Jupyter notebooks, and Streamlit web applications.
singlecellmultimodal
Single Cell multimodal data scripts for downloading datasets
