GitHub

https://github.com

Scientific Software
Updated 11 months ago

EKF_CAL — Peer-reviewed • Science 98%

EKF_CAL: Extended Kalman Filter-based Calibration and Localization - Published in JOSS (2025)

Physics (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

corrp — Peer-reviewed • Science 93%

corrp: An R package for multiple correlation-like analysis and clustering in mixed data - Published in JOSS (2025)

Scientific Software
Updated 11 months ago

popclass — Peer-reviewed • Science 100%

popclass: A Python Package for Classifying Microlensing Events - Published in JOSS (2025)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

remotePARTS — Peer-reviewed • Science 93%

remotePARTS: Spatiotemporal autoregression analyses for large data sets - Published in JOSS (2025)

Earth and Environmental Sciences (40%) Economics (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

target-methylseq-qc — Peer-reviewed • Science 98%

target-methylseq-qc: a lightweight pipeline for collecting metrics from targeted sequence mapping files. - Published in JOSS (2025)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

CUDA-METRO — Peer-reviewed • Science 93%

CUDA-METRO: Parallel Metropolis Monte Carlo for 2D Atomistic Spin Texture Simulation - Published in JOSS (2025)

Artificial Intelligence and Machine Learning Mathematics (45%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

ez-zarr — Peer-reviewed • Science 98%

ez-zarr: A Python package for easy access and visualisation of OME-Zarr filesets - Published in JOSS (2025)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

pooledpeaks — Peer-reviewed • Science 93%

pooledpeaks: Open-Source Fragment Scoring and Analysis Workflow for Population Genetic Analyses of Microsatellite Markers in Pooled Samples - Published in JOSS (2025)

Engineering
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

ParquetDB — Peer-reviewed • Science 93%

ParquetDB: A Lightweight Python Parquet-Based Database - Published in JOSS (2025)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

AutoEIS — Peer-reviewed • Science 98%

AutoEIS: Automated equivalent circuit modeling from electrochemical impedance spectroscopy data using statistical machine learning - Published in JOSS (2025)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

BESMARTS — Peer-reviewed • Science 93%

BESMARTS: A toolkit for data-driven force field design using binary-encoded SMARTS - Published in JOSS (2025)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

EXP — Peer-reviewed • Science 98%

EXP: a Python/C++ package for basis function expansion methods in galactic dynamics - Published in JOSS (2025)

Scientific Software
Updated 11 months ago

Minterpy — Peer-reviewed • Science 93%

Minterpy: multivariate polynomial interpolation in Python - Published in JOSS (2025)

Engineering (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

Topography-based surface water modeling in Julia, with support for infiltration and temporal developments — Peer-reviewed • Science 67%

Topography-based surface water modeling in Julia, with support for infiltration and temporal developments - Published in JOSS (2025)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

DIFFICE-jax — Peer-reviewed • Science 93%

DIFFICE-jax: Differentiable neural-network solver for data assimilation of ice shelves in JAX - Published in JOSS (2025)

Earth and Environmental Sciences (40%) Artificial Intelligence and Machine Learning (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

pengWann — Peer-reviewed • Science 98%

pengWann: Descriptors of chemical bonding from Wannier functions - Published in JOSS (2025)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

Pydre — Peer-reviewed • Science 100%

Pydre: A Python package for driving simulation data reduction - Published in JOSS (2025)

Mathematics
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

OPTIMUS — Peer-reviewed • Science 93%

OPTIMUS: A Multidimensional Global Optimization Package - Published in JOSS (2025)

Computer Science (35%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

ReadmeReady — Peer-reviewed • Science 93%

ReadmeReady: Free and Customizable Code Documentation with LLMs - A Fine-Tuning Approach - Published in JOSS (2025)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

rjaf — Peer-reviewed • Science 95%

rjaf: Regularized Joint Assignment Forest with Treatment Arm Clustering - Published in JOSS (2025)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

LongMemory.jl — Peer-reviewed • Science 100%

LongMemory.jl: Generating, Estimating, and Forecasting Long Memory Models in Julia - Published in JOSS (2025)

Scientific Software
Updated 11 months ago

QuantumACES.jl — Peer-reviewed • Science 98%

QuantumACES.jl: design noise characterisation experiments for quantum computers - Published in JOSS (2025)

Engineering (32%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

DemeterWatch — Peer-reviewed • Science 95%

DemeterWatch: A Java tool to detect Law of Demeter violations in Java collections - Published in JOSS (2025)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

COHESIVM — Peer-reviewed • Science 98%

COHESIVM: Combinatorial h+/e- Sample Investigation using Voltaic Measurements - Published in JOSS (2025)

Scientific Software
Updated 11 months ago

ScatteringOptics.jl — Peer-reviewed • Science 95%

ScatteringOptics.jl: An Interstellar Scattering Framework in the Julia Programming Language - Published in JOSS (2025)

Engineering (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

PeakPerformance - A tool for Bayesian inference-based fitting of LC-MS/MS peaks — Peer-reviewed • Science 96%

PeakPerformance - A tool for Bayesian inference-based fitting of LC-MS/MS peaks - Published in JOSS (2024)

Engineering (40%)
Scientific Software · Peer-reviewed
Updated 10 months ago

https://github.com/erictleung/coursework • Science 10%

:notebook: Coursework for miscellaneous programming, web development, etc courses

Updated 11 months ago

dummydatarepo • Science 67%

Updated 10 months ago

https://github.com/erictleung/freecodecamp-news-analysis • Science 10%

:office: Code and notes on running various database management systems

Scientific Software
Updated 11 months ago

Biosensor Framework — Peer-reviewed • Science 100%

Biosensor Framework: A C# Library for Affective Computing - Published in JOSS (2021)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

IndividualDisplacements.jl — Peer-reviewed • Science 59%

IndividualDisplacements.jl: a Julia package to simulate and study particle displacements within the climate system - Published in JOSS (2021)

Scientific Software · Peer-reviewed
Updated 10 months ago

https://github.com/erictleung/.github • Science 13%

Eric Leung's GitHub settings

Scientific Software
Updated 11 months ago

POMDPStressTesting.jl — Peer-reviewed • Science 98%

POMDPStressTesting.jl: Adaptive Stress Testing for Black-Box Systems - Published in JOSS (2021)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

RivGraph — Peer-reviewed • Science 59%

RivGraph: Automatic extraction and analysis of river and delta channel network topology - Published in JOSS (2021)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

MiTfAT — Peer-reviewed • Science 100%

MiTfAT: A Python-based Analysis Tool for Molecular fMRI Experiments. - Published in JOSS (2021)

Mathematics Medicine
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

3dfier — Peer-reviewed • Science 100%

3dfier: automatic reconstruction of 3D city models - Published in JOSS (2021)

Earth and Environmental Sciences (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

ADI.jl — Peer-reviewed • Science 100%

ADI.jl: A Julia Package for High-Contrast Imaging - Published in JOSS (2020)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

Multiscale Solar Water Heating — Peer-reviewed • Science 98%

Multiscale Solar Water Heating - Published in JOSS (2020)

Computer Science (45%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

pyveg — Peer-reviewed • Science 98%

pyveg: A Python package for analysing the time evolution of patterned vegetation using Google Earth Engine - Published in JOSS (2020)

Political Science Mathematics Sociology
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

ocean_data_tools — Peer-reviewed • Science 95%

ocean_data_tools: A MATLAB toolbox for interacting with bulk freely-available oceanographic data - Published in JOSS (2020)

Engineering Sociology (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

Peacock.jl — Peer-reviewed • Science 98%

Peacock.jl: Photonic crystals in Julia - Published in JOSS (2020)

Updated 10 months ago

https://github.com/erictleung/tables • Science 10%

Convert various delimited text files to LaTeX tables

Updated 11 months ago

pmv-ads-2024-1-e5-proj-empext-t2-fermaloc • Science 44%

pmv-ads-2024-1-e5-proj-fermaloc-t2 created by GitHub Classroom

Scientific Software
Updated 11 months ago

CPgeneProfiler — Peer-reviewed • Science 95%

CPgeneProfiler: A lightweight R package to profile the Carbapenamase genes from genome assemblies - Published in JOSS (2020)

Engineering (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

emba — Peer-reviewed • Science 93%

emba: R package for analysis and visualization of biomarkers in boolean model ensembles - Published in JOSS (2020)

Sociology Earth and Environmental Sciences (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

A parallel global multiobjective framework for optimization — Peer-reviewed • Science 93%

A parallel global multiobjective framework for optimization: pagmo - Published in JOSS (2020)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

qMRLab — Peer-reviewed • Science 95%

qMRLab: Quantitative MRI analysis, under one umbrella - Published in JOSS (2020)

Scientific Software
Updated 11 months ago

CapacityExpansion — Peer-reviewed • Science 95%

CapacityExpansion: A capacity expansion modeling framework in Julia - Published in JOSS (2020)

Scientific Software
Updated 11 months ago

MTEX2Gmsh — Peer-reviewed • Science 98%

MTEX2Gmsh: a tool for generating 2D meshes from EBSD data - Published in JOSS (2020)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

dcgp — Peer-reviewed • Science 95%

dcgp: Differentiable Cartesian Genetic Programming made easy. - Published in JOSS (2020)

Economics (40%)
Scientific Software · Peer-reviewed
Updated 10 months ago

https://github.com/erictleung/job-search-visualization • Science 13%

A data visualization of my job search in 2021

Scientific Software
Updated 11 months ago

COVID-19 Data Hub — Peer-reviewed • Science 95%

COVID-19 Data Hub - Published in JOSS (2020)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

FLAM — Peer-reviewed • Science 95%

FLAM: Fast Linear Algebra in MATLAB - Algorithms for Hierarchical Matrices - Published in JOSS (2020)

Mathematics
Scientific Software · Peer-reviewed
Updated 10 months ago

https://github.com/erictleung/emacs-lisp-deliberate-practice • Science 13%

Deliberate Practice for Learning Emacs Lisp

Updated 10 months ago

https://github.com/erictleung/tidytuesdays • Science 13%

:chart_with_upwards_trend: My attempts at #tidytuesday

Updated 11 months ago

rca • Science 44%

The Code for the runtime tests for the Paper "Rescue Craft Allocation in Tidal Waters of the North and Baltic Sea"

Scientific Software
Updated 11 months ago

pybeach — Peer-reviewed • Science 93%

pybeach: A Python package for extracting the location of dune toes on beach profile transects - Published in JOSS (2019)

Mathematics Artificial Intelligence and Machine Learning
Scientific Software · Peer-reviewed
Updated 10 months ago

https://github.com/erictleung/simplewriter • Science 10%

Vim plugin script to color words that are not simple like in http://xkcd.com/simplewriter/

Scientific Software
Updated 11 months ago

momepy — Peer-reviewed • Science 98%

momepy: Urban Morphology Measuring Toolkit - Published in JOSS (2019)

Political Science Sociology
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

PressureDrop.jl — Peer-reviewed • Science 93%

PressureDrop.jl: Pressure traverses and gas lift analysis for oil & gas wells - Published in JOSS (2019)

Engineering Sociology (40%)
Scientific Software · Peer-reviewed
Updated 11 months ago

resume • Science 44%

My Resume Files & Resume

Updated 11 months ago

rproject • Science 44%

A collection of functions to setup R projects. This package is intended for personal use only.

Updated 11 months ago

autometa • Science 57%

Autometa: Automated Extraction of Genomes from Shotgun Metagenomes

Updated 11 months ago

portaldata • Science 77%

Official Repo of the Portal Project Data

Updated 11 months ago

neon • Science 67%

WIP Prototype of a modern CFD core

Updated 11 months ago

3r_reproducible • Science 44%

Updated 11 months ago

upf-tools • Science 44%

Tools for handling .upf (Unified Pseudopotential Format) files

Updated 11 months ago

mldec • Science 44%

Updated 11 months ago

hpc-intro • Science 44%

Practical course on running jobs on a HPC

Updated 11 months ago

ultralytics_yolo11 • Science 54%

yolo11 with distillate and prune

Updated 11 months ago

a1 • Science 54%

初始代码

Updated 11 months ago

bilinear-inverse-mapper • Science 57%

A powerful C library for finding the parametric co-ordinates of bilinear mapping for any given point with respect to a quadrilateral. These parametric co-ordinates are also utilised in calculating the interpolation functions or shape functions at the given point.

Updated 11 months ago

pet-mad • Science 75%

A universal interatomic potential for advanced materials modeling

Updated 11 months ago

ice_sleep_detpj • Science 54%

한국외국어대 정보통신공학과 졸업논문 연구

Updated 11 months ago

somnium • Science 44%

AI-driven Graphical Adventure Game Engine (... inspired by Sierra On-Line's SCI-era ...)

Updated 11 months ago

zoekplaatje • Science 49%

Zoekplaatje is a Firefox extension to facilitate the capture of search engine results.

Updated 11 months ago

datascience • Science 57%

Sujets de travaux pratiques de module Data Science

Updated 11 months ago

@stdlib/array-base-filled2d-by • Science 44%

Create a filled two-dimensional nested array according to a provided callback function.

Updated 11 months ago

cpg • Science 44%

Updated 11 months ago

loja-de-carros • Science 44%

Updated 11 months ago

suprb • Science 67%

Updated 11 months ago

quantum-in-dutch-newspapers • Science 67%

Code used in the "Quantum Science & Technology in Dutch Newspapers" project

Updated 11 months ago

joes-data • Science 44%

Updated 11 months ago

calibration-multi-spectral-par-sensor • Science 67%

Supplementary material to the publication.

Updated 11 months ago

saia-hub • Science 57%

Updated 11 months ago

core • Science 44%

🔵 Application core of BIIGLE

Updated 11 months ago

dataits • Science 54%

Web for DataITS17: Summer School on Data Science

Updated 11 months ago

locscale • Science 67%

Updated 11 months ago

graphql-api • Science 44%

Backend GraphQL Web Services

Updated 11 months ago

maneuvergpt • Science 54%

Agentic Control for Safe Autonomous Stunt Maneuvers

Updated 11 months ago

code-review • Science 44%

Updated 11 months ago

scalerpy • Science 67%

Python package for fitting scaling relationships to spatially resolved data

Updated 11 months ago

tomebrush • Science 44%

인페인팅 기법에서 masking에 따른 token merging 비율 조정

Updated 11 months ago

queuing-theory • Science 44%

This is a developmental tooling that simulates the jockeying customer in a setup of two queues.

Updated 11 months ago

dcfba • Science 44%

Dynamic Community FBA repository

Updated 11 months ago

parallel-clustering-hybrid • Science 67%

Hybrid Parallel MPI and OpenMP implementations of clustering algorithms. This code was developed for my university thesis.