woop • Science 44%

myc • Science 54%

momenti-motifs • Science 57%

Scalable mining of multidimensional time series motifs.

cell-seek • Science 67%

One single-cell pipeline to rule them all, one pipeline to find them, one pipeline to unify them all, and with the data bind them.

genomica • Science 57%

drjohndee.net • Science 44%

Source code and data for drjohndee.net

salmon-data-standards-workshop • Science 44%

equidistant • Science 44%

Complementary code for equidistant paper

adversarialtriggers • Science 67%

TACL 2025: Investigating Adversarial Trigger Transfer in Large Language Models

headsup • Science 52%

Utility server and web application to observe Unity-based VR tasks operating on headsets via LAN.

collectionbuilder • Science 44%

@stdlib/slice-base-reduced-dimensions • Science 44%

Return a list of reduced dimensions in an un-normalized multi-slice.

fair4rs-virtualenvs • Science 52%

ptlix • Science 44%

Portable Test Library Interface for different RTOSs and Software Test Libraries

observation-box • Science 44%

Stackable boxes for observing animal behavior

spreading-depolarization • Science 44%

Analysis scripts related to manuscript "Hippocampal stroke in freely behaving mice reveals sex differences in presentation and behavioural impact of contralesional spreading depolarization"

lobster • Science 67%

Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation

equivalence-fiddle • Science 67%

Tool for finding the best ways of equating / preordering / distinguishing finite process models.

bigbacter-nf • Science 44%

Bacterial surveillance pipeline.

konnektor • Science 67%

Algorithms for various Network Layouts and Tooling for planning FE Calculations

cheapandfair-template • Science 44%

pycasx • Science 75%

landlensdb • Science 67%

Streamlined geospatial image handling and database management with Python and PostGIS

template • Science 44%

Template/Demo for Oral History as Data (OHD) Framework. Copy it by clicking Use This Template above!

pyfrag • Science 44%

pediatricapplewatchstudy • Science 67%

The Pediatric Apple Watch Study Application

coherent-states-rpa • Science 57%

Code examples for supramolecular polymers using the random phase approximation (RPA)

nadi-system.github.io • Science 44%

Website for Nadi-System related things

intro-to-git • Science 44%

Intro to Git and GitHub for researchers

llamea • Science 67%

Large Language Model Evolutionary Algorithm

seurat-de • Science 44%

Gene ontology analysis and integration for single-cell RNA-seq data

ipcc-author-guidance • Science 44%

https://github.com/acdh-oeaw/dse-static-cookiecutter • Science 57%

Cookiecutter template for a Static-Site Digital Scholarly Edition

reana-tutorial • Science 44%

results-reproducibility • Science 44%

neorv32-riscv • Science 67%

thermalspreadingresistance.jl • Science 44%

Thermal Spreading Resistance

alchemistsimulator.github.io • Science 44%

Alchemist website

diffusion_compose_and_embellish • Science 54%

spike3d • Science 49%

A Diba lab repo for exploring position data using 3D visualization methods in Python/Jupyter-lab

somar • Science 67%

The Stratified Ocean Model with Adaptive Refinement

tango • Science 44%

C++ implementation of Tango Trees

enzo-nbody • Science 44%

ENZO implemented with a direct N-body solver

ProntoPCR: Efficient qPCR Data Analysis Software • Science 87%

ProntoPCR: Efficient qPCR Data Analysis Software - Published in JOSS (2026)

sjenk • Science 44%

Time scheduler

champlaindatatransfer • Science 57%

Transfer of data

sinabs-exodus • Science 54%

Plugin for Sinabs, implementing the EXODUS algorithm for training SNNs efficiently with BPTT

rabbit • Science 57%

esch • Science 44%

An attempted Digital twin of M. C. Escher

bilayers • Science 44%

math-base-special-bernoullif • Science 44%

Compute the nth Bernoulli number as a single-precision floating-point number.

joes-data-portal • Science 44%

scmtr-seq_paper_scripts • Science 67%

nlp-python • Science 54%

Catatan belajar/mengajar kuliah pengolahan bahasa alami (NLP) dengan python

@hugoalh/is-string-singleline • Science 44%

An ECMAScript (JavaScript & TypeScript) module to determine whether the string is single line.

freem-semid-norm • Science 67%

FreEM SemiD norm refers both to: a normalisation model and the normalised corpus used to develop it — a dataset of Middle French texts, normalised according to semi-diplomatic guidelines.

meta-short • Science 54%

Nf-core based workflow for short read metagenomic data

geoflow-tunaatlas • Science 49%

Geoflow Tuna atlas workflow

data-cat • Science 44%

transport-noninteger-wavenumber • Science 67%

fluxon-mhd • Science 44%

FLUX allows efficient modeling of magnetic field evolution in a conductive atmosphere, with exactly prescribed field topology

gaussfit • Science 44%

Scientific Python for Processing EGaIn and CP-AFM Data

dev_guide • Science 54%

rOpenSci Packages: Development, Maintenance, and Peer Review

data • Science 54%

The core data of the Iconclass Classification System

gsrm-cold-points-2025 • Science 67%

Repository for Nugent et al., under review at Earth and Space Science

tislab.org • Science 44%

Public-facing website for tislab.org

r-lib/actions/setup-r • Science 54%

GitHub Actions for the R community

llm-confidentiality • Science 54%

Whispers in the Machine: Confidentiality in Agentic Systems

angel_suite • Science 44%

A collection of very important tools for bioinformatics

realist • Science 44%

The Realistic (REal Adsorption Langmuir Isotherms for Sorption Theory) uses fugacity to fit excess isotherms of any gas to isotherm models to extract thermodyanic adsorption properties

docker-builds • Science 67%

:package: :whale: Dockerfiles and documentation on tools for public health bioinformatics

oteldb • Science 44%

OpenTelemetry signal storage

2025-01-29-eda • Science 57%

lorenz96-compress • Science 67%

Exploring online compression with the Lorenz96 model

coastpy • Science 75%

Python tools for cloud-native coastal analytics

assemblebac • Science 67%

avantonder/assembleBAC is a bioinformatics best-practise analysis pipeline for assembling and annotating bacterial genomes.

meerpipe • Science 57%

nf-core/meerpipe is a astronomy pipeline that processes MeerKAT pulsar data to produce images and data products for pulsar timing analysis

saccelerator • Science 67%

pdll • Science 54%

Pairwise Difference Learning (PDL) is a meta-learning framework that leverages pairwise differences to transform multiclass problems into binary tasks. This repository includes the original PDL Classifier implementation, along with extended versions for regression and weighted learning scenarios.

trump-speech-analysis • Science 44%

Statistical patterns in political rhetoric: The quantitative analysis of Donald Trump's 2024 election campaign speeches

@stdlib/ndarray-mostly-safe-casts • Science 44%

Return a list of ndarray data types to which a provided ndarray data type can be safely cast and, for floating-point data types, can be downcast.

simulation_evaluation • Science 65%

A tool-spec compliant research tool to create sophisticated simulation result reports

generativenetworkmodels • Science 44%

lang-bxr • Science 44%

Finite state and Constraint Grammar based analysers and proofing tools, and language resources for the Russia Buriat language

colbuilder • Science 67%

Building collagen fibrils from amino acids sequences

shapda • Science 57%

Pytorch Code for our paper Domain-Invariant Monitoring for Lactic Acid Production: Transfer Learning from Glucose to Bio-Waste Using Machine Learning Interpretation

ratpac2-tutorial • Science 44%

natural-disasters-analysis-worldwide • Science 44%

spn4cir • Science 54%

[ACM MM 2024] Improving Composed Image Retrieval via Contrastive Learning with Scaling Positives and Negatives

deepart • Science 67%

tcc • Science 44%

Optimizing IoT Cloud Applications for Scalability: Leveraging RPC with Distributed Queues for Seamless Operations

DifferentialRiccatiEquations • Science 65%

Solvers for autonomous matrix-valued generalized differential Riccati equations (GDREs) with low-rank solutions.

@stdlib/ndarray-iter-columns • Science 44%

Create an iterator which iterates over each column in a matrix (or stack of matrices).

mgvt • Science 67%

Modular architecture for an AI-based 3D Virtual Teacher (Bachelor's thesis 2025)

neural-tangents • Science 54%

echoflow • Science 44%

A particle filter based target tracker for marine radar, LIDAR and other range-based sensors

tscf-mmseg-agronav • Science 44%

gaseous-object-detection • Science 54%

Gaseous Object Detection, T-PAMI2024

autoconvxai • Science 44%

kelp-temperature-tolerance • Science 54%

Kelp temperature tolerance dataset