publication-figure-retrieval • Science 54%

This tool provides a method for retrieving publication figure images from NIH's Entrez API based on a list of species.

fabric-stain-dataset • Science 44%

FABRIC STAIN DATASET

carbonr — Peer-reviewed • Science 93%

carbonr: An R Package for Estimating Carbon-Equivalent Emissions - Published in JOSS (2024)

dota • Science 44%

DOTA: A Large-Scale Benchmark and Challenges for Object Detection in Aerial Images v2.0

construction-vehicle-images • Science 44%

wnstatmech • Science 44%

Python package to compute the thermodynamics of fermions and bosons.

btad • Science 44%

BTAD: BeanTech Anomaly Detection Dataset

stata-waffle • Science 44%

A Stata package for Waffle charts

async_tutorial • Science 44%

my-data • Science 44%

A collection of projects I am working on or have completed.

2024_kdvh_rr • Science 49%

Code to reproduce experiments in paper on hyperbolic relaxation of KdV equation.

dynamite • Science 49%

Bayesian Inference of Complex Panel Data

modified-ultralytics • Science 44%

dual_lbr_fri_ros2_stack • Science 49%

RHEOS.jl -- A Julia Package for Rheology Data Analysis — Peer-reviewed • Science 95%

RHEOS.jl -- A Julia Package for Rheology Data Analysis - Published in JOSS (2019)

GRBoondi — Peer-reviewed • Science 98%

GRBoondi: A code for evolving Generalized Proca theories on arbitrary backgrounds - Published in JOSS (2024)

annotated-quantitative-phase-microscopy-cell-dataset • Science 44%

Annotated quantitative phase microscopy cell dataset of various adherent cell lines for segmentation purposes

stats-base-ztest-one-sample-results-float64 • Science 44%

Create a one-sample Z-test double-precision floating-point results object.

strawberry-disease-detection • Science 44%

Strawberry Disease Detection Dataset

yolov5-imporve-method • Science 44%

qrackmin • Science 44%

ThereminQ Qrackmin QuantOPS : HPC Qrack container images

pascal-voc-2012 • Science 44%

gcd-biologic • Science 44%

Python script to read and plot galvanostatic charge-discharge data from Biologic equipment.

goat-image-dataset • Science 44%

Goat Image Dataset

fastapi-neo4j • Science 44%

Template for building FastAPI applications with Neo4j(neontology).

entropic-spacetime-framework • Science 44%

repo.host("ESF manuscript"); type="meta-theoretical proposal"; goal="unify physics & emergent complexity"; fields=; mechanism="resonant coupling"; addresses=; speculates=["consciousness", "QC", "life"]; status="living document"; updates=["derivations", "simulations", "feedback"]; invite_collaborators(["physics", "cosmology", "neuroscience", "AI"]).

aircraft_classification • Science 44%

MSc Thesis: Impact of Metadata on Aircraft Classification in Satellite Imagery

plastic-bottles • Science 44%

5,592 labeled plastic bottles in rivers

@stdlib/array-base-flatten5d-by • Science 44%

Flatten a five-dimensional nested array according to a callback function.

deepseedling • Science 44%

DeepSeedling

npu-bolt • Science 44%

NPU-BOLT - A Dataset for Bolt Object Detection in Natural Scene Images

ndnd • Science 44%

Golang implementation of the Named Data Networking protocol stack

cocostuff10k • Science 44%

validateHOT - an R package for the analysis of holdout/validation tasks and other choice modeling tools — Peer-reviewed • Science 98%

validateHOT - an R package for the analysis of holdout/validation tasks and other choice modeling tools - Published in JOSS (2025)

mcpmod • Science 44%

MCP-Mod for small samples with binary endpoint.

irb-kit • Science 44%

Extends IRB by providing additional productivity enhancements.

vhsjuliakurspackage.jl • Science 44%

Übungspaket für Julia-Kurs

edd2020 • Science 44%

XCALibre.jl — Peer-reviewed • Science 93%

XCALibre.jl: A Julia XPU unstructured finite volume Computational Fluid Dynamics library - Published in JOSS (2025)

perrenial-plants • Science 44%

automatic-monitoring-pigs • Science 44%

Automatic Monitoring of Pigs’ Physico-Temporal Activities at Different Greenhouse Gas Concentrations

maize-whole-plant-image-dataset • Science 44%

Maize whole plant image dataset

2025-07-02_greenhpc_ucl • Science 52%

https://github.com/dmey/elefridge.jl • Science 13%

Compressing atmospheric data into its real information

opencows2020 • Science 44%

OpenCows2020: Visual Identification of Individual Holstein Friesian Cattle via Deep Metric Learning

kolektor-surface-defect-dataset-2 • Science 44%

oakville-land-use-classification • Science 44%

Optimizing Deep Learning Models for Classifying Urban Land Cover.

master-trajdata • Science 54%

remote-sensing-land-cover-dataset • Science 44%

LoveDA: A Remote Sensing Land-Cover Dataset for Domain Adaptive Semantic Segmentation

QGDipoles.jl — Peer-reviewed • Science 98%

QGDipoles.jl: A Julia package for calculating dipolar vortex solutions to the Quasi-Geostrophic equations - Published in JOSS (2025)

rubocop-lts-rspec • Science 44%

Meta gem for projects tested with RSpec & linted with rubocop-lts

clothing-co-parsing • Science 44%

Clothing Co-Parsing by Joint Image Segmentation and Labeling

chest-xray • Science 44%

mh1ddc • Science 67%

:earth_asia: MH1DDC is inversion software using Levenberg-Marquardt (LM) and Singular Value Decomposition (SVD) of one-dimension DC resistivity in MATLAB.

mh2dgrav • Science 57%

:earth_asia: MH2DGRAV is continuous two-dimension inversion of Gravity data based on Talwani formulation using very fast simulated annealing (VFSA) in MATLAB.

commensurability — Peer-reviewed • Science 93%

commensurability: a Python package for classifying astronomical orbits based on their toroid volume - Published in JOSS (2025)

hagis • Science 59%

Analysis of Plant Pathogen Pathotype Complexities, Distributions and Diversity

2025-10-01-uwmadison-mini • Science 52%

pld-uav • Science 44%

PLD-UAV: Power Line Detection in UAV

VoteKit — Peer-reviewed • Science 93%

VoteKit: A Python package for computational social choice research - Published in JOSS (2025)

msim • Science 57%

Mars Subsurface Ice Model (MSIM): Thermal and Ice Evolution Models for Mars

SpectriPy — Peer-reviewed • Science 98%

SpectriPy: Enhancing Cross-Language Mass Spectrometry Data Analysis with R and Python - Published in JOSS (2025)

https://github.com/dmey/ecrad • Science 13%

ECMWF atmospheric radiation scheme

ParticleTracking — Peer-reviewed • Science 98%

ParticleTracking: A GUI and library for particle tracking on stereo camera images - Published in JOSS (2025)

LCOI — Peer-reviewed • Science 93%

LCOI: Local crystalline orientation identifier using mask fitting implemented in MATLAB - Published in JOSS (2025)

kettle-soup-cover • Science 44%

A Covered Kettle of SOUP, A Code Coverage Meta Gem

6 • Science 49%

When is it favorable to do two-step or one-pot coupled enzyme reactions?

master-thesis • Science 44%

Code for my master thiesis in Theoretical Quantum Optics from Niels Bohr Institute, University of Copenhagen with supervision by Professor Klaus Mølmer

yolov5 • Science 54%

introduction-to-renv • Science 75%

Walkthrough tutorial on setting up and using renv

multi-topography-dataset-for-wind-turbine-detection • Science 44%

Multi-topography dataset for wind turbine detection from remote sensing image

https://github.com/dmey/bitinformation.jl • Science 23%

Information between bits and bytes.

versatile-xr-user-identification • Science 67%

Implementation of "Versatile User Identification in Extended Reality Using Pretrained Similarity-Learning". Deep metric learning approach for identifying VR users from their movements.

nf-rsvpipeline • Science 67%

Viral RSV analysis pipeline using Illumina or Oxford Nanopore Technologies amplicon-based sequencing data

nyplaybills • Science 44%

A collection of Broadway playbills from NYC

@stdlib/array-base-strided2array3d • Science 44%

Convert a strided array to a three-dimensional nested array.

BenchmarkDataNLP.jl — Peer-reviewed • Science 93%

BenchmarkDataNLP.jl: Synthetic Data Generation for NLP Benchmarking - Published in JOSS (2025)

segui • Science 44%

A GUI version of the SEGUL phylogenomic tool

sigmajs — Peer-reviewed • Science 93%

sigmajs: An R htmlwidget interface to the sigma.js visualization library - Published in JOSS (2018)

stats-base-ndarray-sztest • Science 44%

Compute a one-sample Z-test for a one-dimensional single-precision floating-point ndarray.

@stdlib/complex-float32-conj • Science 44%

Return the complex conjugate of a single-precision complex floating-point number.

@stdlib/assert-is-ragged-nested-array • Science 44%

Test if a value is a ragged nested array

ndarray-base-output-dtype • Science 44%

Resolve the output data type from a list of input ndarray data types.

stats-strided-dsemwd • Science 57%

Calculate the standard error of the mean for a double-precision floating-point strided array using Welford's algorithm.

nounoursusvsbears • Science 44%

aisp-lab • Science 44%

quince-set • Science 44%

biobb-flexdyn • Science 67%

biobb_flexdyn is a BioBB category for studies on the conformational landscape of native proteins.

ParticleScattering — Peer-reviewed • Science 95%

ParticleScattering: Solving and optimizing multiple-scattering problems in Julia - Published in JOSS (2018)

camp-lab-website • Science 44%

Source code for the CAMP Lab at TU Delft website

plasmodium-falciparum-from-images-of-giemsa • Science 44%

Malaria Segmentation - A dataset for segmentation of malaria infected cells

blas-base-ndarray-gdot • Science 44%

Compute the dot product of two one-dimensional ndarrays.

PositiveIntegrators.jl — Peer-reviewed • Science 100%

PositiveIntegrators.jl: A Julia library of positivity-preserving time integration methods - Published in JOSS (2025)

math-base-special-aversinf • Science 44%

Compute the inverse versed sine of a single-precision floating-point number (in radians).

maize-cobs • Science 44%

Maize Cobs: A Dataset for DeepCob Analysis

OpenTTDLab — Peer-reviewed • Science 98%

OpenTTDLab: A Python framework for reproducible experiments using OpenTTD - Published in JOSS (2025)

MultiVae — Peer-reviewed • Science 98%

MultiVae: A Python package for Multimodal Variational Autoencoders on Partial Datasets. - Published in JOSS (2025)

stats-strided-svariancewd • Science 57%

Calculate the variance of a single-precision floating-point strided array using Welford's algorithm.

DiRe - JAX — Peer-reviewed • Science 93%

DiRe - JAX: A JAX based Dimensionality Reduction Algorithm for Large-scale Data - Published in JOSS (2025)

blas-ext-base-ndarray-gcusum • Science 44%

Compute the cumulative sum of a one-dimensional ndarray.