https://github.com/bioconductor/bioconductor-training • Science 49%

Bioconductor teaching and education committee

https://github.com/bio-rsg/oceancolour • Science 49%

Package of custom functions for remote sensing data analysis

https://github.com/bin-cao/shapev • Science 49%

[JMI 2022 | Aggregate 2025] A package for searching equivalent values based on joined SHAP values

subjectivescalesmodels.jl • Science 44%

A Julia package for Beta-like regression models useful for subjective scales data (Likert scales, analog scales, ...)

https://github.com/berenslab/llm-excess-vocab • Science 49%

Delving into LLM-assisted writing in biomedical publications through excess vocabulary

https://github.com/benny0323/deep-learning-based-mia-tasks • Science 49%

⭐[A Deep Survey] Paper List For Metal Artifact Reduction including traditional and deepl leanring based methods. ℱℯℯ𝓁 𝒻𝓇ℯℯ to contribute!

https://github.com/beiko-lab/beiko-lab.github.io • Science 49%

https://github.com/bblodfon/pdac-efs-bench2024 • Science 49%

Feature Selection benchmark and analysis on multi-omics PDAC datasets

https://github.com/bayer-group/unidino • Science 49%

https://github.com/bartongroup/ligysis-web • Science 57%

https://github.com/baltic-coastal-monitoring-team/geopoint • Science 67%

GeoPOINT – Synthetic Point Generator for Geospatial Applications

https://github.com/baaihealth/opencomplex2 • Science 49%

initial repo

https://github.com/awesomecosmos/aayushi-verma-cv • Science 49%

Aayushi Verma's Curriculum Vitae.

https://github.com/auroradysis/kerrp2p • Science 49%

KerrP2P is a software designed for forward ray tracing in Kerr spacetime. It is specifically tailored to efficiently calculate multiple null geodesics between designated "source" and "observer" points, locate apparent positions of the corresponding images, and quantify their shapes.

https://github.com/attpc/spyral • Science 49%

A Python analysis library for AT-TPC data

https://github.com/chendaniely/2022-01-06-ttt_demo • Science 44%

TTT workshop demo

https://github.com/astrazeneca/topmodel • Science 49%

Uses simulated time-to-event data to model efficacy by prevalence-adjusted nAb titres using a time-varying Cox model.

hotsub — Peer-reviewed • Science 93%

hotsub: A batch job engine for cloud services with ETL framework - Published in JOSS (2018)

https://github.com/assert-kth/vrepair • Science 49%

open science repo of "Neural Transfer Learning for Repairing Security Vulnerabilities in C Code" https://arxiv.org/pdf/2104.08308

survxai — Peer-reviewed • Science 93%

survxai: an R package for structure-agnostic explanations of survival models - Published in JOSS (2018)

https://github.com/chen-yang-liu/git-rsclip • Science 49%

Git-RSCLIP pre-trained on 10 million Remote sensing image-text pairs

https://github.com/aspuru-guzik-group/pasithea • Science 57%

Deep Molecular Dreaming

https://github.com/chen-yang-liu/awesome-change-captioning • Science 49%

🔥Collection of resources and papers

https://github.com/arkokupski-wat/subjective_time_as_emergent_information_processing • Science 49%

The Brain's Clock: From the Phoenix Equation to Holographic Consciousness

bem — Peer-reviewed • Science 95%

bem: modeling for neutron Bragg-edge imaging - Published in JOSS (2018)

https://github.com/arkokupski-wat/hypothesis-of-spontaneous-matter-antimatter-conversion • Science 49%

Hypothesis of Spontaneous Matter→Antimatter Conversion at Planck Densities

https://github.com/arkokupski-wat/g1g2-gravity-duality • Science 49%

🌌 G₁/G₂ Gravity Duality: Proves quantum & cosmic gravity are distinct phenomena.

https://github.com/arkokupski-wat/modified-spacetime-hypothesis • Science 49%

The hypothesis treats spacetime not as a passive backdrop for matter, but as an equal partner in physical transformations. The inspiration stems from explosive chemistry—specifically, how the detonation of high-energy materials mixtures) converts condensed matter into expanding gases and energy.

https://github.com/aria-systems-group/regret_synthesis_toolbox • Science 49%

Source code for Regret synthesis for two-player turn-based game played on graphs - ICRA 22

https://github.com/arcadia-science/agent-literature-review • Science 49%

GrainSizeTools — Peer-reviewed • Science 90%

GrainSizeTools: a Python script for grain size analysis and paleopiezometry based on grain size - Published in JOSS (2018)

https://github.com/antoine-buetti/nf-core-tumorscope • Science 57%

https://github.com/anon0411/decoh_as_codom • Science 49%

Feedback-guided quantum circuits exploring codomain-zero as a structural condition. 구조 형성의 조건으로서 공역 0을 실험하는 피드백 기반 양자 회로.

https://github.com/annahedstroem/sanity-checks-revisited • Science 49%

[NeurIPS XAIA & Springer] Code and notebooks to paper "A Fresh Look at Sanity Checks for Saliency Maps"

https://github.com/anhph95/neslter-stingray • Science 49%

https://github.com/anananacr/bblib • Science 44%

beambusters library

https://github.com/ambco-iscte/jask • Science 49%

A Library for Generating Questions about Learners' Code in Java

GEM — Peer-reviewed • Science 95%

GEM: A Python package for graph embedding methods - Published in JOSS (2018)

https://github.com/amazon-science/mxeval • Science 46%

Combining a Probability and a Non-Probability Sample in a Capture-Recapture Setting — Peer-reviewed • Science 95%

Combining a Probability and a Non-Probability Sample in a Capture-Recapture Setting - Published in JOSS (2018)

https://github.com/aloncrack7/data-degradation-detector • Science 49%

Library to make stimations on data degradation

Limbo — Peer-reviewed • Science 95%

Limbo: A Flexible High-performance Library for Gaussian Processes modeling and Data-Efficient Optimization - Published in JOSS (2018)

https://github.com/aksw/frankgraphbench • Science 49%

The FranKGraphBench is a Framework to allow KG Aware RSs to be benchmarked in a reproducible and easy to implement manner. It was first created on Google Summer of Code 2023 for Data Integration between DBpedia and some standard RS datasets in a reproducible framework.

https://github.com/ajpelu/c_allocation_pine • Science 49%

https://github.com/cheminfo/jeol-data-test • Science 49%

https://github.com/aiformedresearch/synthetic_images_metrics_toolkit • Science 49%

SIM Toolkit: 2D and 3D synthetic image quality assessment using quantitative and qualitative metrics.

https://github.com/ai4bharat/fbi • Science 49%

FBI: Finding Blindspots in LLM Evaluations with Interpretable Checklists

CLIMLAB — Peer-reviewed • Science 95%

CLIMLAB: a Python toolkit for interactive, process-oriented climate modeling - Published in JOSS (2018)

https://github.com/agroboticsresearch/headland_trajectory_planning • Science 49%

This repo is includes headland space modeling and trajectory planning for autonomous agricultural vehicle in the orchard.

https://github.com/agda/agda2lambox • Science 57%

Compiling Agda's internal syntax to λ-box terms.

TSrepr R package — Peer-reviewed • Science 93%

TSrepr R package: Time Series Representations - Published in JOSS (2018)

Gramm — Peer-reviewed • Science 95%

Gramm: grammar of graphics plotting in Matlab - Published in JOSS (2018)

exocore • Science 44%

GIBBON — Peer-reviewed • Science 95%

GIBBON: The Geometry and Image-Based Bioengineering add-On - Published in JOSS (2018)

https://github.com/adrientaudiere/mitemaptools • Science 49%

https://github.com/adicksonlab/agdiff • Science 49%

Implementation of AGDIFF: Attention-Enhanced Diffusion for Molecular Geometry Prediction

https://github.com/adaptivemotorcontrollab/cellseg3d • Science 59%

A napari plugin for direct 3D cell segmentation -- taking you through training, inference, and review of masks

https://github.com/abhishektiwari/scholarimpact • Science 54%

ScholarImpact: A bibliometric tool to analyse, visualise, and share your research impact, output and scholarly influence using Google Scholar and OpenAlex data.

https://github.com/robelgium/msnoise • Science 59%

A Python Package for Monitoring Seismic Velocity Changes using Ambient Seismic Noise | http://www.msnoise.org

https://github.com/kmnhan/erlabpy • Science 54%

Complete python workflow for Angle-Resolved Photoemission Spectroscopy (ARPES)

https://github.com/openchemistry/tomviz • Science 46%

Cross platform, open source application for the processing, visualization, and analysis of 3D tomography data

https://github.com/chem-william/biotsavart • Science 49%

Implementation of Biot-Savart law

gaimerstablediffusion • Science 54%

https://github.com/smonto2/ptfa • Science 49%

https://github.com/patrickzib/dictionary • Science 49%

WEASEL 2.0 - A Random Dilated Dictionary Transform for Fast, Accurate and Constrained Memory Time Series Classification

https://github.com/ajshajib/dolphin • Science 49%

Automated pipeline for lens modelling based on lenstronomy

https://github.com/desbordante/desbordante-core • Science 49%

Desbordante is a high-performance data profiler that is capable of discovering many different patterns in data using various algorithms. It also allows to run data cleaning scenarios using these algorithms. Desbordante has a console version and an easy-to-use web application.

https://github.com/ibridges-for-irods/ibridges • Science 49%

A wrapper around the python-irodsclient to allow for easy interaction with iRODS servers.

peptipedia • Science 57%

Mosquitto — Peer-reviewed • Science 54%

Mosquitto: server and client implementation of the MQTT protocol - Published in JOSS (2017)

https://github.com/georgedouzas/imbalanced-learn-extra • Science 49%

Implementation of novel oversampling algorithms.

magicbathynet • Science 49%

Quick start guide for benchmarking MagicBathyNet dataset in learning-based bathymetry and pixel-based classification using Remote Sensing imagery.

shadia • Science 59%

shadia: dam passage performance standard models for R

nse — Peer-reviewed • Science 93%

nse: Computation of Numerical Standard Errors in R - Published in JOSS (2017)

hddtools — Peer-reviewed • Science 49%

hddtools: Hydrological Data Discovery Tools - Published in JOSS (2017)

IDEAS • Science 49%

Modelica library allowing simultaneous transient simulation of thermal and electrical systems at both building and feeder level.

mena-fcv-economic-monitor • Science 44%

dynawo • Science 46%

This repository contains Dynaωo's simulation tool code.

ai • Science 54%

AI for Capstone Design

sheeprl • Science 44%

maintainer-onboarding • Science 54%

rtloc • Science 67%

RTLoc - Real Time Location for earthquake early warning

yolov5-master • Science 54%

foundation-model-benchmarking-tool • Science 54%

Foundation model benchmarking tool. Run any model on any AWS platform and benchmark for performance across instance type and serving stack options.

kedro_fork • Science 44%

yolov5_eiou • Science 54%

https://github.com/duclong1608/YOLOv5_EIoU.git

greenlight-gym2 • Science 54%

Reinforcement learning environment for controlling greenhouse crop production systems. The greenhouse dynamics are based on GreenLight..

differential-equations • Science 44%

A high-performance library for numerically solving differential equations in Rust

voice-spoofing-detection-audio • Science 44%

my_yolo • Science 54%

robot_remote_control • Science 44%

A library for framework independent remote control of semi-autonomous robots. The library is in active development and might change a lot.

mini-callcenter-simulator • Science 67%

Mini Callcenter Simulator simulates a call center and takes into account many parameters not covered by the Erlang C formula.

lemons • Science 54%

Generate non-circuLar, anthropometry-based pEdestrian shapes and simulate their Mechanical interactiONS in two dimensions

ucbcl • Science 44%

augmentedgaussianprocesses.jl • Science 64%

Gaussian Process package based on data augmentation, sparsity and natural gradients

spreadsheet-ecology-lesson • Science 54%

TNC: Distributed Tensor Network Contractions in Rust • Science 90%

TNC: Distributed Tensor Network Contractions in Rust - Published in JOSS (2026)

manim • Science 44%

globalid-database • Science 57%

Here you can find the most recent version of the GlobaLID database. Stable versions are regularly published at https://doi.org/10.5880/fidgeo.2023.043

WoodTapper: a Python package for explaining decision tree ensembles • Science 87%

WoodTapper: a Python package for explaining decision tree ensembles - Published in JOSS (2026)