bamojax • Science 67%

Bayesian Modelling using Jax

NonSysId: Nonlinear System Identification with Improved Model Term Selection for NARMAX Models • Science 93%

NonSysId: Nonlinear System Identification with Improved Model Term Selection for NARMAX Models - Published in JOSS (2025)

THz Image Explorer - An Interactive Cross-Platform Open-Source THz Image Analysis Tool • Science 93%

THz Image Explorer - An Interactive Cross-Platform Open-Source THz Image Analysis Tool - Published in JOSS (2025)

phylo2vec • Science 67%

Phylo2Vec: a vector representation for binary trees

PyDrugLogics: A Python Package for Predicting Drug Synergies Using Boolean Models • Science 93%

PyDrugLogics: A Python Package for Predicting Drug Synergies Using Boolean Models - Published in JOSS (2025)

MetaSpread: A cancer growth and metastatic spread simulation program in Python • Science 93%

MetaSpread: A cancer growth and metastatic spread simulation program in Python - Published in JOSS (2025)

mlr3extralearners: Expanding the mlr3 Ecosystem with Community-Driven Learner Integration • Science 95%

mlr3extralearners: Expanding the mlr3 Ecosystem with Community-Driven Learner Integration - Published in JOSS (2025)

deepinv • Science 54%

DeepInverse: a PyTorch library for solving imaging inverse problems using deep learning

mlgidGUI - an annotation program for 2D scattering data • Science 93%

mlgidGUI - an annotation program for 2D scattering data - Published in JOSS (2025)

STON: SofTware for petrOgraphic visualisatioN • Science 87%

STON: SofTware for petrOgraphic visualisatioN - Published in JOSS (2025)

optimeo • Science 67%

OPTIMEO is a package doubled by a web application that helps you optimize your experimental process by generating a Design of Experiment, generating new experiments using Bayesian Optimization (BO), and analyzing the results of your experiments using Machine Learning models.

PathFinder: A Matlab/Octave package for oscillatory integration • Science 93%

PathFinder: A Matlab/Octave package for oscillatory integration - Published in JOSS (2025)

NeuroCAPs — Peer-reviewed • Science 93%

NeuroCAPs: A Python Package for Performing Co-Activation Patterns Analyses on Resting-State and Task-Based fMRI Data - Published in JOSS (2025)

ActiSleep Tracker — Peer-reviewed • Science 93%

ActiSleep Tracker: a Python-based dashboard for adjusting automatic sleep predictions of actigraphy data - Published in JOSS (2025)

HINA — Peer-reviewed • Science 98%

HINA: A Learning Analytics Tool for Heterogenous Interaction Network Analysis in Python - Published in JOSS (2025)

calzone-tool • Science 44%

Evaluating the Calibration of Probabilistic Models

PANKH: An unsteady potential flow solver for hovering airfoils • Science 93%

PANKH: An unsteady potential flow solver for hovering airfoils - Published in JOSS (2025)

elasticipy • Science 49%

A python toolkit to perform common tensor operations in Continuum Mechanics

eitprocessing • Science 44%

Software for electrical impedance tomography data loading, visualization and processing

sata • Science 67%

opensim-creator • Science 49%

A UI for building OpenSim models

PyMetric: A Geometry Informed Array Mathematics Package • Science 87%

PyMetric: A Geometry Informed Array Mathematics Package - Published in JOSS (2026)

SPAC: A Python Package for Spatial Single-Cell Analysis of Multiplexed Imaging • Science 87%

SPAC: A Python Package for Spatial Single-Cell Analysis of Multiplexed Imaging - Published in JOSS (2026)

pyforce: Python Framework for data-driven model Order Reduction of multi-physiCs problEms • Science 87%

pyforce: Python Framework for data-driven model Order Reduction of multi-physiCs problEms - Published in JOSS (2026)

vkcompviz • Science 44%

Vulkan image and data processing framework capable of running a cascade of compute shaders and displaying or storing the result.

constrainthg • Science 67%

General system simulation using constraint hypergraphs

itwinai • Science 44%

Advanced AI workflows for scientific digital twins

hermes-rheo • Science 49%

Python package designed to complement and extend the piblin library, offering a set of transforms tailored for analysis of rheological data

SatRbedo: An R package for retrieving snow and ice albedo from optical satellite imagery • Science 87%

SatRbedo: An R package for retrieving snow and ice albedo from optical satellite imagery - Published in JOSS (2026)

torch_blue: A Flexible Python Package for Bayesian Neural Networks in PyTorch • Science 87%

torch_blue: A Flexible Python Package for Bayesian Neural Networks in PyTorch - Published in JOSS (2026)

https://github.com/spectralmatch/spectralmatch • Science 49%

Relative radiometric normalization toolkit for raster mosaics and time series

FAIRmaterials: Ontology Tools with Data FAIRification in Development • Science 87%

FAIRmaterials: Ontology Tools with Data FAIRification in Development - Published in JOSS (2026)

tools4rdf • Science 44%

Collection of tools for working with RDF data

$\mathcal{H}$-HIGNN Toolkit: A Software for Efficient and Scalable Simulation of Large-Scale Particulate Suspensions Using GNNs and $\mathcal{H}$-Matrices • Science 90%

$\mathcal{H}$-HIGNN Toolkit: A Software for Efficient and Scalable Simulation of Large-Scale Particulate Suspensions Using GNNs and $\mathcal{H}$-Matrices - Published in JOSS (2026)

aiida-aimall: A Python package for automating workflows for AIMAll software • Science 87%

aiida-aimall: A Python package for automating workflows for AIMAll software - Published in JOSS (2026)

OnlinePCA.jl: A Julia Package for Out-of-core and Sparse Principal Component Analysis • Science 87%

OnlinePCA.jl: A Julia Package for Out-of-core and Sparse Principal Component Analysis - Published in JOSS (2026)

OnlineNMF.jl: A Julia Package for Out-of-core and Sparse Non-negative Matrix Factorization • Science 87%

OnlineNMF.jl: A Julia Package for Out-of-core and Sparse Non-negative Matrix Factorization - Published in JOSS (2026)

Reyna: A minimal overhead polytopal discontinuous Galerkin finite element library • Science 87%

Reyna: A minimal overhead polytopal discontinuous Galerkin finite element library - Published in JOSS (2026)

A Python API for OTTER • Science 87%

A Python API for OTTER - Published in JOSS (2026)

c3dr • Science 67%

Read and write C3D motion capture data in R

rydiqule • Science 75%

Rydberg Sensor Interactive Quantum Physics Module

MieSimulatorGUI: A user-friendly tool to compute and visualize light scattering by spherical dielectric particles • Science 87%

MieSimulatorGUI: A user-friendly tool to compute and visualize light scattering by spherical dielectric particles - Published in JOSS (2026)

Dyad: a binary-star dynamics and statistics library for Python • Science 87%

Dyad: a binary-star dynamics and statistics library for Python - Published in JOSS (2026)

pyfive: A pure-Python HDF5 reader • Science 92%

pyfive: A pure-Python HDF5 reader - Published in JOSS (2026)

r.earthworks • Science 67%

An add-on tool for computational terrain modeling in GRASS

BiGSTARS.jl: A Julia package for bi-global stability analysis for rotating stratified flows • Science 87%

BiGSTARS.jl: A Julia package for bi-global stability analysis for rotating stratified flows - Published in JOSS (2026)

regularizedoptimization.jl • Science 67%

Algorithms for regularized optimization

anvay: A Web-based Tool for Interpretive Topic Modelling in Bengali • Science 87%

anvay: A Web-based Tool for Interpretive Topic Modelling in Bengali - Published in JOSS (2026)

Htool-DDM: A C++ library for parallel solvers and compressed linear systems. • Science 92%

Htool-DDM: A C++ library for parallel solvers and compressed linear systems. - Published in JOSS (2026)

KinOpt: A Python package for chemical kinetics analysis and optimization • Science 87%

KinOpt: A Python package for chemical kinetics analysis and optimization - Published in JOSS (2026)

FluxOptics.jl: A Differentiable Wave Optics Framework for Inverse Design in Julia • Science 87%

FluxOptics.jl: A Differentiable Wave Optics Framework for Inverse Design in Julia - Published in JOSS (2026)

Graphorge: An open-source forge of graph neural networks • Science 87%

Graphorge: An open-source forge of graph neural networks - Published in JOSS (2026)

tangram, an open platform for modular, real-time air traffic management research • Science 96%

tangram, an open platform for modular, real-time air traffic management research - Published in JOSS (2025)

simulist • Science 67%

An R package for simulating line lists

devcontainer-images • Science 44%

2024-03-28-um-scientific-computing-r • Science 54%

94486a7f-e046-461f-bbb9-334ec7b57040 • Science 67%

Showcasing the detectreeRGB model

jointanalysisfastingpostprandialglucoseinsulin • Science 57%

Code of the paper "Joint analysis of fasting and postprandial plasma glucose and insulin concentrations in Venezuelan women"

2016-09-12-florida-international-university • Science 54%

2019-03-21_miller-school-of-medicine • Science 54%

containers • Science 44%

Building and deploying container images for open source electronic design automation (EDA)

benchmark_hub • Science 49%

A FAIR-compliant hub for GPU auto-tuning benchmarking resources, providing fully brute-forced search spaces and their source files (kernel files and T1 input files). Anyone can contribute by providing new kernels and brute-forced search spaces on new configurations.

ont-seq-analysis • Science 57%

ONT-Seq-analysis is a specialized pipeline designed for analyzing Oxford Nanopore Technologies (ONT) sequencing data from Mpox isolates. It performs reference-based assemblies, identifies variants, designates clades, and generates a detailed quality control (QC) report.

manifold-mcmc-for-diffusions • Science 54%

Code accompanying the paper 'Manifold MCMC methods for Bayesian inference in a wide class of diffusion models'

hello-cuda • Science 67%

A basic "Hello world" or "Hello CUDA" example to perform a number of operations on NVIDIA GPUs using CUDA.

dataanalysistemplate • Science 44%

📋📊A template to perform data analysis in R using #Rmarkdown. It produces a template paper in .md, .tex, .pdf, .doc, .html

demogh • Science 44%

duvel • Science 67%

Data set for Detection of Unique Variant Ensemble in Literature

pycoef • Science 44%

discretecontrollers • Science 44%

C++ Implementation of Discrete Controllers

lumerical_fdtd_scripting_tools • Science 44%

A collection of scripts categorised by their use-case intended for use in the Lumerical FDTD solver in the Ansys optics suite. Some scripts are cross-compatible with MODE as well.

kinesinlms • Science 44%

A simple, open-source Learning Management System.

vwa2 • Science 54%

bobsonandice • Science 44%

Bobson and Ice website

online-social-network-analysis-election-prediction • Science 67%

Online Social Network Analysis Election Prediction

stats-strided-dmidrange • Science 44%

Calculate the mid-range of a double-precision floating-point strided array.

tiwid • Science 54%

This is where identifiers die

lp-pascal-pong • Science 44%

Projeto desenvolvido para o seminário sobre a linguagem Pascal.

regulondb-browser • Science 44%

Component Repository for RegulonDB Browser

iob-cache • Science 57%

Verilog Configurable Cache

cbm24sasnil • Science 67%

Reimplementation of CBM'24 paper Unsupervised Domain Adaptation for Histopathology Image Segmentation with Incomplete Labels

mift • Science 54%

Masked Image Fourier Transform

plasmodiumtransmissionintensity • Science 44%

sixarm_ruby_numeric_round • Science 44%

SixArm.com » Ruby » Numeric #round, #floor, #ceil methods with precision

https://github.com/alon-albalak/data-selection-survey • Science 49%

A Survey on Data Selection for Language Models

sixarm_ruby_rexml_element_new_with_options • Science 44%

SixArm.com » Ruby » REXML::Element.new_with_options methods to build elements

ndarray-base-min-signed-integer-dtype • Science 44%

Determine the minimum ndarray data type for storing a provided signed integer value.

sixarm_ruby_password_text • Science 44%

SixArm.com » Ruby » PasswordText class to generate good secure random password

selims_enchants • Science 44%

Selim's Enchantments Minecraft mod for MineClone2

nfdata • Science 52%

Multimedia spatiotemporal model of nanomaterial fate, speciation and bio-uptake.

dstructs-stack • Science 44%

Stack.

blenky • Science 44%

quickly configurable low-power BLE to GPIO bridge and gpioASM runtime

dhdt • Science 44%

Extracting topography from mountain glaciers, through the use of shadow casted by surrounding mountains.

generateurdecitaion • Science 44%

cpp2wasm • Science 67%

Guide to make C++ available as a web application

cff-initializer-javascript • Science 44%

Web form to initialize CITATION.cff files.

zeeschuimer • Science 49%

A browser extension to collect social media data with.

constants-float32-gamma-lanczos-g • Science 44%

Arbitrary constant `g` to be used in Lanczos approximation functions.

https://github.com/aloncrack7/mlops-researchproject-tfm • Science 49%

Project improving TFG upgrading MLOps level to 2

mmdetection_aic • Science 54%