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BiocSingular

Clone of the Bioconductor repository for the BiocSingular package.

https://github.com/ltla/biocsingular

Science Score: 23.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    2 of 5 committers (40.0%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (4.3%) to scientific vocabulary

Keywords

bioconductor-package human-cell-atlas singular-value-decomposition

Keywords from Contributors

core-package dimension-reduction feature-extraction gene-expression shiny single-cell transcriptomics matrix-library gene grna-sequence
Last synced: 6 months ago · JSON representation

Repository

Clone of the Bioconductor repository for the BiocSingular package.

Basic Info
Statistics
  • Stars: 8
  • Watchers: 3
  • Forks: 4
  • Open Issues: 5
  • Releases: 0
Topics
bioconductor-package human-cell-atlas singular-value-decomposition
Created over 7 years ago · Last pushed over 1 year ago

https://github.com/LTLA/BiocSingular/blob/master/ 

# Singular value decomposition for Bioconductor

|Build|Status|
|-----|----|
| Bioc-release | [![](https://bioconductor.org/shields/build/release/bioc/BiocSingular.svg)](https://bioconductor.org/checkResults/release/bioc-LATEST/BiocSingular) |
| Bioc-devel   | [![](https://bioconductor.org/shields/build/devel/bioc/BiocSingular.svg)](https://bioconductor.org/checkResults/devel/bioc-LATEST/BiocSingular) | 

This package provides a consistent class interface for singular value decompositions and principal components analysis for use throughout the Bioconductor ecosystem.
Check out the user guide on the [Bioconductor landing page](https://bioconductor.org/packages/devel/bioc/html/BiocSingular.html) for more details.

Owner

  • Name: Aaron Lun
  • Login: LTLA
  • Kind: user
  • Location: San Francisco
  • Company: @Genentech

It/Its (ノಠ益ಠ)ノ彡┻━┻

GitHub Events

Total
  • Watch event: 1
  • Fork event: 3
Last Year
  • Watch event: 1
  • Fork event: 3

Committers

Last synced: about 1 year ago

All Time
  • Total Commits: 272
  • Total Committers: 5
  • Avg Commits per committer: 54.4
  • Development Distribution Score (DDS): 0.386
Past Year
  • Commits: 8
  • Committers: 2
  • Avg Commits per committer: 4.0
  • Development Distribution Score (DDS): 0.25
Top Committers
Name Email Commits
Aaron Lun a****n@c****k 167
LTLA i****s@g****m 73
Nitesh Turaga n****a@g****m 14
Aaron Lun a****n@w****u 10
J Wokaty j****y 8
Committer Domains (Top 20 + Academic)
wehi.edu.au: 1 cruk.cam.ac.uk: 1

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 13
  • Total pull requests: 4
  • Average time to close issues: 18 days
  • Average time to close pull requests: 1 day
  • Total issue authors: 12
  • Total pull request authors: 2
  • Average comments per issue: 2.69
  • Average comments per pull request: 1.25
  • Merged pull requests: 2
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • LTLA (2)
  • brgew (1)
  • robertamezquita (1)
  • DarioS (1)
  • drisso (1)
  • lwaldron (1)
  • wenbostar (1)
  • davisidarta (1)
  • pablo-rodr-bio2 (1)
  • mkarikom (1)
  • xiangpin (1)
Pull Request Authors
  • LTLA (4)
  • jonathangriffiths (1)
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • bioconductor 1,026,853 total
  • Total dependent packages: 28
  • Total dependent repositories: 0
  • Total versions: 5
  • Total maintainers: 1
bioconductor.org: BiocSingular

Singular Value Decomposition for Bioconductor Packages

  • Versions: 5
  • Dependent Packages: 28
  • Dependent Repositories: 0
  • Downloads: 1,026,853 Total
Rankings
Dependent repos count: 0.0%
Dependent packages count: 2.6%
Downloads: 3.3%
Average: 9.3%
Stargazers count: 18.1%
Forks count: 22.5%
Maintainers (1)
infinite.monkeys.with.keyboards@gmail.com
Last synced: 6 months ago