WormTensor
R package for a Clustering Method for Time-Series Whole-Brain Activity Data of C. elegans
Science Score: 49.0%
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✓.zenodo.json file
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✓DOI references
Found 3 DOI reference(s) in README -
✓Academic publication links
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○Scientific vocabulary similarity
Low similarity (9.5%) to scientific vocabulary
Repository
R package for a Clustering Method for Time-Series Whole-Brain Activity Data of C. elegans
Basic Info
Statistics
- Stars: 1
- Watchers: 3
- Forks: 0
- Open Issues: 0
- Releases: 2
Metadata Files
README.md
WormTensor
R package for a Clustering Method for Time-Series Whole-Brain Activity Data of C. elegans
Installation of Dependent Packages
~~~~
GHCR
docker pull ghcr.io/rikenbit/wormtensor ~~~~ or ~~~~
Docker Hub
docker pull yamaken37/wormtensor ~~~~
Installation
~~~~ git clone https://github.com/rikenbit/WormTensor/ R CMD INSTALL WormTensor ~~~~ or type the code below in the R console window ~~~~ library(devtools) devtools::install_github("rikenbit/WormTensor") ~~~~ or type the code below in the R console window ~~~~
CRAN
install.packages(c("WormTensor"), repos="http://cran.r-project.org") ~~~~
License
Copyright (c) 2022 Kentaro Yamamoto and Laboratory for Bioinformatics Research, RIKEN Center for Biosystems Dynamics Reseach Released under the MIT License.
Authors
- Kentaro Yamamoto
- Koki Tsuyuzaki
- Itoshi Nikaido
Owner
- Name: RIKEN BiT
- Login: rikenbit
- Kind: organization
- Location: Japan
- Website: https://bit.riken.jp/
- Twitter: dritoshien
- Repositories: 80
- Profile: https://github.com/rikenbit
Laboratory for Bioinformatics Research, RIKEN Center for Biosystems Dynamics Research
GitHub Events
Total
- Watch event: 1
- Push event: 2
- Create event: 1
Last Year
- Watch event: 1
- Push event: 2
- Create event: 1
Issues and Pull Requests
Last synced: 10 months ago
All Time
- Total issues: 24
- Total pull requests: 1
- Average time to close issues: 2 months
- Average time to close pull requests: less than a minute
- Total issue authors: 3
- Total pull request authors: 1
- Average comments per issue: 3.08
- Average comments per pull request: 0.0
- Merged pull requests: 1
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 1
- Pull requests: 1
- Average time to close issues: about 3 hours
- Average time to close pull requests: less than a minute
- Issue authors: 1
- Pull request authors: 1
- Average comments per issue: 8.0
- Average comments per pull request: 0.0
- Merged pull requests: 1
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- kokitsuyuzaki (20)
- yamaken37 (4)
- asardaes (1)
Pull Request Authors
- yamaken37 (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
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Total downloads:
- cran 255 last-month
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 3
- Total maintainers: 1
cran.r-project.org: WormTensor
A Clustering Method for Time-Series Whole-Brain Activity Data of 'C. elegans'
- Homepage: https://github.com/rikenbit/WormTensor
- Documentation: http://cran.r-project.org/web/packages/WormTensor/WormTensor.pdf
- License: MIT + file LICENSE
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Latest release: 0.1.2
published 11 months ago
Rankings
Maintainers (1)
Dependencies
- R >= 4.1.0 depends
- Rtsne * imports
- aricode * imports
- clValid * imports
- cluster * imports
- clusterSim * imports
- dtwclust * imports
- ggplot2 * imports
- rTensor * imports
- uwot * imports
- testthat >= 3.0.0 suggests
- actions/checkout v2 composite
- docker/build-push-action v1 composite
- docker/login-action v1 composite
- bioconductor/bioconductor_docker devel build