PyWavelets
PyWavelets: A Python package for wavelet analysis - Published in JOSS (2019)
PyMatting
PyMatting: A Python Library for Alpha Matting - Published in JOSS (2020)
PyAutoLens
PyAutoLens: Open-Source Strong Gravitational Lensing - Published in JOSS (2021)
Pylinac
Pylinac: Image analysis for routine quality assurance in radiotherapy - Published in JOSS (2023)
LiberTEM
LiberTEM: Software platform for scalable multidimensional data processing in transmission electron microscopy - Published in JOSS (2020)
Nanomesh
Nanomesh: A Python workflow tool for generating meshes from image data - Published in JOSS (2022)
VIP
VIP: A Python package for high-contrast imaging - Published in JOSS (2023)
giotto-deep
giotto-deep: A Python Package for Topological Deep Learning - Published in JOSS (2022)
xtal2png
xtal2png: A Python package for representing crystal structure as PNG files - Published in JOSS (2022)
MIRP
MIRP: A Python package for standardised radiomics - Published in JOSS (2024)
imager
imager: an R package for image processing based on CImg - Published in JOSS (2019)
Logodetect
Logodetect: One-shot detection of logos in image and video data - Published in JOSS (2022)
HistoJS
HistoJS: Web-Based Analytical Tool for Advancing Multiplexed Images - Published in JOSS (2024)
SIHR
SIHR: a MATLAB/GNU Octave toolbox for single image highlight removal - Published in JOSS (2020)
atems
atems: Analysis tools for TEM images of carbonaceous particles - Published in JOSS (2024)
FijiRelax
FijiRelax: Fast and noise-corrected estimation of MRI relaxation maps in 3D + t - Published in JOSS (2023)
LiGuard
LiGuard: Interactively and Rapidly Create Point-Cloud and Image Processing Pipelines - Published in JOSS (2025)
motila
Pipeline for analyzing microglial fine process motility from 4D/5D multi-photon imaging data
deepinv
DeepInverse: a PyTorch library for solving imaging inverse problems using deep learning