Pooch
Pooch: A friend to fetch your data files - Published in JOSS (2020)
matchms - processing and similarity evaluation of mass spectrometry data.
matchms - processing and similarity evaluation of mass spectrometry data. - Published in JOSS (2020)
PyMatting
PyMatting: A Python Library for Alpha Matting - Published in JOSS (2020)
TorchGAN
TorchGAN: A Flexible Framework for GAN Training and Evaluation - Published in JOSS (2021)
Verde
Verde: Processing and gridding spatial data using Green’s functions - Published in JOSS (2018)
cuallee
cuallee: A Python package for data quality checks across multiple DataFrame APIs - Published in JOSS (2024)
icepyx
icepyx: querying, obtaining, analyzing, and manipulating ICESat-2 datasets - Published in JOSS (2023)
eemont
eemont: A Python package that extends Google Earth Engine - Published in JOSS (2021)
quimb
quimb: A python package for quantum information and many-body calculations - Published in JOSS (2018)
toqito -- Theory of quantum information toolkit
toqito -- Theory of quantum information toolkit: A Python package for studying quantum information - Published in JOSS (2021)
PyClustering
PyClustering: Data Mining Library - Published in JOSS (2019)
piecewise-regression (aka segmented regression) in Python
piecewise-regression (aka segmented regression) in Python - Published in JOSS (2021)
VeridicalFlow
VeridicalFlow: a Python package for building trustworthy data science pipelines with PCS - Published in JOSS (2022)
Cadabra2
Cadabra2: computer algebra for field theory revisited - Published in JOSS (2018)
timeseriesflattener
timeseriesflattener: A Python package for summarizing features from (medical) time series - Published in JOSS (2023)
ParMOO
ParMOO: A Python library for parallel multiobjective simulation optimization - Published in JOSS (2023)
MemCNN
MemCNN: A Python/PyTorch package for creating memory-efficient invertible neural networks - Published in JOSS (2019)
Bodge
Bodge: Python package for efficient tight-binding modeling of superconducting nanostructures - Published in JOSS (2024)
KALMUS
KALMUS: tools for color analysis of films - Published in JOSS (2021)
OMEGA-Py
OMEGA-Py: Python Tools for OMEGA Data - Published in JOSS (2024)
PyFstat
PyFstat: a Python package for continuous gravitational-wave data analysis - Published in JOSS (2021)
kalepy
kalepy: a Python package for kernel density estimation, sampling and plotting - Published in JOSS (2021)
PII-Codex
PII-Codex: a Python library for PII detection, categorization, and severity assessment - Published in JOSS (2023)
Crowsetta
Crowsetta: A Python tool to work with any format for annotating animal vocalizations and bioacoustics data. - Published in JOSS (2023)
pref_voting
pref_voting: The Preferential Voting Tools package for Python - Published in JOSS (2025)
Pyrgg
Pyrgg: Python Random Graph Generator - Published in JOSS (2017)
Manif
Manif: A micro Lie theory library for state estimation in robotics applications - Published in JOSS (2020)
Caliban
Caliban: Docker-based job manager for reproducible workflows - Published in JOSS (2020)
Model dispersion with PRISM; an alternative to MCMC for rapid analysis of models
Model dispersion with PRISM; an alternative to MCMC for rapid analysis of models - Published in JOSS (2019)
madupite
madupite: A High-Performance Distributed Solver for Large-Scale Markov Decision Processes - Published in JOSS (2025)
humanleague
humanleague: a C++ microsynthesis package with R and python interfaces - Published in JOSS (2018)
HiPart
HiPart: Hierarchical Divisive Clustering Toolbox - Published in JOSS (2023)
neworder
neworder: a dynamic microsimulation framework for Python - Published in JOSS (2021)
mmappickle
mmappickle: Python 3 module to store memory-mapped numpy array in pickle format - Published in JOSS (2018)
Ecos
Ecos: An accessible and intuitive co-simulation framework - Published in JOSS (2025)
labjack-controller
labjack-controller: Robust and Easy Data Collection with Labjack T-Series DAQs in Python - Published in JOSS (2019)
pyMultiFit: A Python library for fitting data with multiple models
pyMultiFit: A Python library for fitting data with multiple models - Published in JOSS (2025)
Local clustering
Local clustering - Published in JOSS (2018)
Eniric
Eniric: Extended NIR Information Content - Published in JOSS (2019)
deepCR
deepCR: Cosmic Ray Rejection with Deep Learning - Published in JOSS (2019)
h3ppy
h3ppy: An open-source Python package for modelling and fitting H$_3^+$ spectra - Published in JOSS (2025)
hsi-wizard: A magical open-source Python package for medical hyperspectral imaging applications
hsi-wizard: A magical open-source Python package for medical hyperspectral imaging applications - Published in JOSS (2025)
Opycleid
Opycleid: A Python package for transformational music theory - Published in JOSS (2018)
rFBP
rFBP: Replicated Focusing Belief Propagation algorithm - Published in JOSS (2020)
PyGModels
PyGModels: A Python package for exploring Probabilistic Graphical Models with Graph Theoretical Structures - Published in JOSS (2021)
pySRURGS - a python package for symbolic regression by uniform random global search
pySRURGS - a python package for symbolic regression by uniform random global search - Published in JOSS (2019)
Py-school-match
Py-school-match: Matching algorithms to assign students to schools - Published in JOSS (2019)
DMT-core
DMT-core: A Python Toolkit for Semiconductor Device Engineers - Published in JOSS (2022)