petab
PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology
mp3d
Code of paper: Revisiting 3D Context Modeling with Supervised Pre-training for Universal Lesion Detection on CT Slices
https://github.com/beastyblacksmith/measurements.jl
Error propagation calculator and library for physical measurements. It supports real and complex numbers with uncertainty, arbitrary precision calculations, operations with arrays, and numerical integration.
https://github.com/blink1073/vidsrc
Read frames from video files as numpy arrays via Microsoft's DirectShow IMediaDet interface.
https://github.com/beastyblacksmith/moleculardynamics.jl
Julia utilities for reading in and analyzing Gromacs simulation results
https://github.com/awickert/pymt
A Python toolkit for running and coupling Earth surface models
isingchat
A library to calculate the thermodynamic properties of a 1D Ising spin chain with beyond nearest-neighbor interactions.