https://github.com/braindatalab/emp_code • Science 13%

code for EEGManyPipelines project

https://github.com/braindatalab/roiconnect • Science 13%

ROI connectivity analysis in EEG

https://github.com/brainets/seeg-ebrains • Science 10%

Scripts for loading and analyzing SEEG datasets present on EBRAINS

https://github.com/braingeneers/catalogger • Science 26%

https://github.com/braingeneers/human_hippocampus_supplement • Science 26%

Supplemental figures and tables for manuscript

https://github.com/braingeneers/mission_control • Science 26%

Contains the full stack of braingeneers services as well as start/stop procedures.

https://github.com/braingeneers/rtsort-web • Science 26%

https://github.com/braingeneers/sims-web • Science 49%

Attempt to run SIMS inference in the browser

https://github.com/braingeneers/protosequences • Science 26%

Analysis code for our paper "Protosequences in brain organoids model intrinsic brain states"

https://github.com/braingeneers/cell-space • Science 26%

https://github.com/braingeneers/easyephys • Science 13%

Quick way to pull ephys data from S3 and visualize data with BraingeneersPy

https://github.com/braingeneers/search • Science 23%

Prototype search engine for experiment object store

https://github.com/braingeneers/cellxgene-ingest • Science 13%

Download scRNASeq from CZ Cell x Gene Census upload to NRP S3 optimized for ML

https://github.com/braingeneers/iot_education_lab_on_chip_paper • Science 13%

We wrote educational programs for remote IoT and local IoT outreach in Bolivia.

https://github.com/braingeneers/braingeneers-docker-images • Science 10%

Repository for braingeneers docker images

https://github.com/braingeneers-education/bme-118-2025-introduction-to-electrophysiology-mighettowastaken • Science 10%

bme-118-spring-2025-bme-118-2025-introduction-to-electrophysiology-WetAI-Electrophysiology-1 created by GitHub Classroom

https://github.com/braingeneers-education/bme-118-2025-introduction-to-electrophysiology-jamesvlf • Science 10%

bme-118-spring-2025-bme-118-2025-introduction-to-electrophysiology-WetAI-Electrophysiology-1 created by GitHub Classroom

https://github.com/braingeneers-education/bme-118-2025-introduction-to-electrophysiology-bv-2025 • Science 10%

bme-118-spring-2025-bme-118-2025-introduction-to-electrophysiology-WetAI-Electrophysiology-1 created by GitHub Classroom

https://github.com/braingeneers-education/bme-118-2025-introduction-to-electrophysiology-schoolshiv • Science 10%

bme-118-spring-2025-bme-118-2025-introduction-to-electrophysiology-WetAI-Electrophysiology-1 created by GitHub Classroom

https://github.com/braingeneers-education/wetai-final-project-spring2024 • Science 23%

The second part of the final project, students will access their data and devise several analysis techniques to present on and write a final paper with