FGTpartitioner
FGTpartitioner: A rapid method for parsimonious delimitation of ancestry breakpoints in large genome-wide SNP datasets - Published in JOSS (2020)
mimosa
mimosa: A Modern Graphical User Interface for 2-level Mixed Models - Published in JOSS (2020)
fib-tf
fib-tf: A TensorFlow-based Cardiac Electrophysiology Simulator - Published in JOSS (2018)
AutoRA
AutoRA: Automated Research Assistant for Closed-Loop Empirical Research - Published in JOSS (2024)
proEQUIB
proEQUIB: IDL Library for Plasma Diagnostics and Abundance Analysis - Published in JOSS (2018)
arcos and arcospy
arcos and arcospy: R and Python packages for accessing the DEA ARCOS database from 2006 - 2014 - Published in JOSS (2020)
An Open-Source Tool for Generating Domain-Specific Accelerators for Resource-Constrained Computing
An Open-Source Tool for Generating Domain-Specific Accelerators for Resource-Constrained Computing - Published in JOSS (2024)
GGoutlieR
GGoutlieR: an R package to identify and visualize unusual geo-genetic patterns of biological samples - Published in JOSS (2023)
Kanapy
Kanapy: A Python package for generating complex synthetic polycrystalline microstructures - Published in JOSS (2019)
Agents.jl
Agents.jl: agent-based modeling framework in Julia - Published in JOSS (2019)
PyOTC: A Python Package for Optimal Transition Coupling
PyOTC: A Python Package for Optimal Transition Coupling - Published in JOSS (2026)
bmi-topography
Fetch and cache land elevation data from OpenTopography through an API, BMI, or CLI
Overlapping
Overlapping: a R package for Estimating Overlapping in Empirical Distributions - Published in JOSS (2018)
Baargin
Baargin: a Nextflow workflow for the automatic analysis of bacterial genomics data with a focus on Antimicrobial Resistance - Published in JOSS (2023)
OmniTrax
OmniTrax: A deep learning-driven multi-animal tracking and pose-estimation add-on for Blender - Published in JOSS (2024)
HRnV-Calc
HRnV-Calc: A Software for Heart Rate n-Variability and Heart Rate Variability Analysis - Published in JOSS (2023)
Reference Point Calculator (RPC)
Reference Point Calculator (RPC): A Shiny app for exploration of limit reference points for fisheries management - Published in JOSS (2023)
SHGYield
SHGYield - Published in JOSS (2017)