ABSESpy: An agent-based modeling framework for social-ecological systems
ABSESpy: An agent-based modeling framework for social-ecological systems - Published in JOSS (2024)
CRED
CRED: a rapid peak caller for Chem-seq data - Published in JOSS (2019)
YoungTab
YoungTab - Published in JOSS (2017)
Algorithms for SEM-EDS Mineral Dust Classification
Algorithms for SEM-EDS Mineral Dust Classification - Published in JOSS (2025)
Habfuzz
Habfuzz: A tool to calculate the instream hydraulic habitat suitability using fuzzy logic and fuzzy Bayesian inference - Published in JOSS (2016)
fff_segmenter
fff_segmenter: A signal segmentation script for acoustic FFF fabrication data in MATLAB - Published in JOSS (2024)
OpenEPSim
OpenEPSim: An Open Exclusion Process Simulation Tool - Published in JOSS (2018)
Bioassays
Bioassays: a new package in R for analyzing cellular assays - Published in JOSS (2020)
gitlab2prov
🔍️ Extract provenance information (W3C PROV) from GitLab projects.
BCEA
Bayesian Cost Effectiveness Analysis. Given the results of a Bayesian model (possibly based on MCMC) in the form of simulations from the posterior distributions of suitable variables of costs and clinical benefits for two or more interventions, produces a health economic evaluation. Compares one of the interventions (the "reference") to the others ("comparators"). Produces many summary and plots to analyse the results
esmvaltool
ESMValTool: A community diagnostic and performance metrics tool for routine evaluation of Earth system models in CMIP
NiTransforms
NiTransforms: A Python tool to read, represent, manipulate, and apply $n$-dimensional spatial transforms - Published in JOSS (2021)
@kit-data-manager/react-pid-component
The PID-Component is a web component that can be used to display PIDs, ORCiDs, and possibly other identifiers in a user-friendly way. It is easily extensible to support other identifier types.
parcels
Main code for Parcels - a highly customisable Lagrangian simulation framework
DEVSIM
DEVSIM: A TCAD Semiconductor Device Simulator - Published in JOSS (2022)
pettingzoo
An API standard for multi-agent reinforcement learning environments, with popular reference environments and related utilities