https://github.com/clinical-genomics/docker-base-images
A collection of useful images to be used as base images for Dockerfiles
https://github.com/clinical-genomics/testrepo_remove-
short-read Nono-Invasive Prenatal pipeline evaluation Tool
https://github.com/clinical-genomics/fusion-report-old-fork
Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline. Checkout a live demo at https://matq007.github.io/fusion-report/example/
https://github.com/clinical-genomics-umea/index_tool
A tool to save sequencing indices in a json-based format.
https://github.com/clinical-infection-research-uosheffield/nasimmune_transcriptome
Code to reproduce analysis from a manuscript title "Mucosal and Blood Transcriptomes Differentiate Immune Responses Following Live-Attenuated Influenza Vaccination in Children"
https://github.com/clinical-infection-research-uosheffield/mucosal_immune_responses_streptococcus_pyogenes
Code to reproduce analyses from manuscript entitled "Mucosal immune responses to Streptococcus pyogenes across the life course in a high burden setting: a focus on candidate vaccine antigens"
https://github.com/clint-bg/aitechnicalwriting
A short presentation using reveal.js to show examples and student perceptions in AI-augmented technical writing
https://github.com/clint-bg/streamlit-diffusion
Diffusion simulator using random walks
https://github.com/clkroll/konradaeroformerge
Implementation of a radiative-convective equilibrium model.
https://github.com/clkroll/konrad
Implementation of a radiative-convective equilibrium model.
