multistateQTL • Science 26%

Summarize and visualize multi-state QTL data

MPAC • Science 36%

An R package to infer cancer pathway activities from multi-omic data

https://github.com/cheesesnakes/whatfishdo • Science 13%

An opencv application to help with behavioural data collection from videos.

knowYourCG • Science 26%

https://github.com/braingeneers-education/bme-118-2025-introduction-to-electrophysiology-howyoubinh • Science 10%

bme-118-spring-2025-bme-118-2025-introduction-to-electrophysiology-WetAI-Electrophysiology-1 created by GitHub Classroom

GenomAutomorphism • Science 46%

An R package to compute the autimorphisms between pairwise aligned DNA sequences represented as elements from a Genomic Abelian group as described in the paper [Genomic Abelian Finite Groups](https://www.biorxiv.org/content/10.1101/2021.06.01.446543v2)

mysteryann • Science 44%

🏆 Winning NeurIPS (NIPS) Competition Track: Big ANN, Practical Vector Search Challenge 2023. （see big-ann-benchmark https://big-ann-benchmarks.com/neurips23.html). The fastest cross-modal vector retrieval.

https://github.com/cheind/py-globalflow • Science 13%

Python implementation of "Global Data Association for MOT Tracking using Network Flows"

biomaRt • Science 26%

R package providing query functionality to BioMart instances like Ensembl

eit-dash • Science 44%

GUI for EIT data processing

miaViz • Science 26%

Microbiome Analysis Plotting and Visualization

visiumStitched • Science 36%

R package containing functions useful for stitching Visium capture areas. Related to the example human brain data described at http://research.libd.org/visiumStitched_brain/.

somalier • Science 67%

fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy"

TrIdent • Science 39%

TrIdent- Transduction Identification: Automatic detection, classification and characterization of active transduction events in microbiomes.

attomo • Science 44%

Python package for pulse-echo ultrasound attenuation tomography

https://github.com/cheind/py-cgraph • Science 26%

:tangerine: Intro to symbolic computation in Python including applications to function optimization, physics simulation and more. Includes notebooks on back-propagation, auto-diff and more.

go-bench-errors • Science 44%

Benchmarking Go errors

https://github.com/cloud-span/genomics-workshop • Science 23%

Genomics Workshop Overview

GenomicInteractionNodes • Science 23%

https://github.com/barricklab/plannotate • Science 23%

Webserver and command line tool for annotating engineered plasmids