https://github.com/bio-phys/af2_lir_screen
AlphaFold2 Multimer pipeline to identify candidate LIR motifs
https://github.com/bio-phys/vanthofffitting
Nonlinear least squares fitting of van 't Hoff plots via cubic splines, which makes the extraction of heat capacity and thermodynamic potentials possible.
https://github.com/bio-phys/diffusionmle
Analyze experimental tracking data using a maximum likelihood estimator (MLE) to extract translational diffusion coefficients.
https://github.com/bio-pnpi/gromacs-pyapi
Gromacs Python API bindings for analysis tools
https://github.com/bio-rsg/marea_satellite
Scripts to process satellite data for use in the marea R package
https://github.com/bioai-oslo/conjunctiverepresentations
Biological Spatial Representations
https://github.com/bioai-oslo/regdnns
Exploring soft and hard constraints in artificial neural networks.
https://github.com/bpbond/licorsc
Convert JSON downloads from a LI-COR smart chamber into a data frame
https://github.com/bpbond/millennial
This is a repository for the newly developed Millennial model
https://github.com/bpbond/soildatar
This is an R package that haromonizes some digitial soil repositories.
https://github.com/bpbond/grossmethane
code for processing gross methane production and consumption in upland soil incubations
https://github.com/bpbond/forte-subcanopy-phys
Subcanopy leaf physiological data integration and analysis, FoRTE 2018