metatdenovo • Rank 5.8 • Science 57%

Assembly and annotation of metatranscriptomic or metagenomic data for prokaryotic, eukaryotic and viruses.

mosca • Rank 4.7 • Science 26%

Meta-Omics Software for Community Analysis

veba • Science 67%

A modular end-to-end suite for in silico recovery, clustering, and analysis of prokaryotic, microeukaryotic, and viral genomes from metagenomes

keggcharter • Science 54%

A tool for representing genomic potential and transcriptomic expression into KEGG pathways

magmap • Science 31%

Nextflow (nf-core) workflow for mapping reads to large collections of genomes.

nf-core-phiflow • Science 31%

EMC-MetaMicrobes • Science 54%

Nextflow pipeline to detect and classify microbial reads in sequencing data from human samples.