Updated 9 months ago
https://github.com/camilogarciabotero/phaster-dataprocessing-scripts
This repo hosts several scripts developed for data processing related to PHASTER outputs that will be included in the manuscript in preparation about Bacillus tequilensis genome
Updated 9 months ago
bacannot
Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.
annotation
antimicrobial-genes-annotation
barrnap
genome-analysis
genome-browser
genomic-islands-prediction
insertion-sequences
ko-annotation
methylation-annotation
mobile-genetic-elements
nextflow
phigaro
pipeline
prophage-sequences-prediction
prophages
reproducible-research
rgi
rrna-prediction
virulence-factor
virulence-genes