Updated 6 months ago
msprime
Simulate genealogical trees and genomic sequence data using population genetic models
Updated 6 months ago
pangenome-gene-transfer-simulation
Simulating and estimating the effect of gene transfer on bacterial pangenomes.
Updated 5 months ago
https://github.com/cnr-ibba/nf-treeseq
Nextflow pipeline to convert genotype data into Tree Sequences