GitHub / cloud-span 23 projects

Cloud-SPAN

Cloud-based High Performance Computing for SPecialised ANalyses on environmental 'omics

http://cloud-span.york.ac.uk/

Projects

Updated 9 months ago

metagenomics00-overview • Science 75%

Metagenomics course overview

Updated 9 months ago

03genomics • Science 75%

Assessing read quality then trimming and filtering reads

Updated 9 months ago

prenomics01-file-directories • Science 75%

Understanding file directories and introduction to the shell environment

Updated 9 months ago

metagenomics03-taxonomic-anno • Science 75%

Metagenomics Taxonomic Annotations lesson

Updated 9 months ago

aws-instances • Science 75%

Scripts for managing multiple AWS instances and some data examples: gc_run01_data and gc_run02_data

Updated 9 months ago

nerc-metagenomics02-command-line • Science 75%

NERC Metagenomics Command Line

Updated 9 months ago

core-r • Science 75%

Updated 9 months ago

04genomics • Science 75%

Finding sequence variants

Updated 9 months ago

cloud-admin-guide-2-managing-aws-instances • Science 75%

Cloud Admin Guide course - lesson Managing AWS Instances

Updated 9 months ago

nerc-metagenomics01-file-directories • Science 75%

NERC Metagenomics File Directories

Updated 9 months ago

nerc-metagenomics06-taxonomic-anno • Science 75%

NERC Metagenomics Taxonomic Annotations

Updated 9 months ago

nerc-metagenomics00-overview • Science 75%

NERC Metagenomics Overview

Updated 9 months ago

nerc-metagenomics03-qc-assembly • Science 75%

NERC Metagenomics QC Assembly

Updated 9 months ago

nerc-metagenomics04-polishing • Science 75%

NERC Metagenomics Polishing

Updated 9 months ago

nerc-metagenomics05-binning • Science 75%

NERC Metagenomics Binning

Updated 9 months ago

metagenomics04-binning_funa • Science 75%

Metagenomics Binning and Functional Annotation lesson

Updated 9 months ago

metagenomics01-qc-assembly • Science 75%

Metagenomics QC and Assembly lesson

Updated 9 months ago

cloudspan-handbook • Science 75%

CloudSPAN Handbook