GitHub

https://github.com

Updated 10 months ago

dagmc • Rank 9.5 • Science 54%

Direct Accelerated Geometry Monte Carlo Toolkit

Updated 10 months ago

ipsframework • Rank 9.5 • Science 54%

Python framework for coupled HPC simulations

Updated 10 months ago

basedosdados • Rank 19.5 • Science 44%

⚙️ Código de manutenção do datalake (metadados e pacotes de acesso) | 📖 Docs: https://basedosdados.org/docs/home

Updated 10 months ago

cobrexa.jl • Rank 6.5 • Science 57%

Constraint-Based Reconstruction and EXascale Analysis

Updated 10 months ago

znvis • Rank 9.5 • Science 54%

A visualisation engine for particle simulations

Scientific Software
Updated 10 months ago

ECNet — Peer-reviewed • Rank 9.5 • Science 54%

ECNet: Large scale machine learning projects for fuel property prediction - Published in JOSS (2017)

Artificial Intelligence and Machine Learning (31%)
Scientific Software · Peer-reviewed
Updated 10 months ago

presto • Rank 9.4 • Science 54%

Open source pulsar search and analysis toolkit

Updated 10 months ago

@stdlib/blas-ext-base-gsumkbn • Rank 6.4 • Science 57%

Calculate the sum of strided array elements using an improved Kahan–Babuška algorithm.

Updated 10 months ago

polydedupe • Rank 6.4 • Science 57%

PolyDeDupe: Multi-Lingual Data Deduplication

Updated 10 months ago

cspstandsegmentation • Rank 4.4 • Science 59%

R package for single tree delination from TLS/MLS/ULS point clouds

Updated 10 months ago

spanner • Rank 4.4 • Science 59%

Utilities to support landscape-, forest-, and tree-related data collection, manipulation, analysis, modelling, and visualization.

Updated 9 months ago

https://github.com/antsx/antspymm • Rank 4.4 • Science 59%

utilities for processing modalities beyond T1w

Updated 10 months ago

pavo • Rank 14.4 • Science 49%

tools for the analysis of color data in R

r
Updated 10 months ago

spalloc • Rank 9.4 • Science 54%

SpiNNaker machine allocation client.

Updated 10 months ago

pyiron_gui • Rank 9.4 • Science 54%

Extended graphical user interface (GUI) for pyiron the integrated development environment (IDE)

Updated 10 months ago

mmand • Rank 14.4 • Science 49%

Mathematical Morphology in Any Number of Dimensions

Updated 10 months ago

mscclpp • Rank 9.4 • Science 54%

MSCCL++: A GPU-driven communication stack for scalable AI applications

Updated 10 months ago

numbas • Rank 9.4 • Science 54%

A completely browser-based e-assessment/e-learning system, with an emphasis on mathematics

Updated 10 months ago

wiser.jl • Rank 1.4 • Science 62%

WISER: multimodal variational inference for full-waveform inversion without dimensionality reduction

Updated 10 months ago

gnn-parity-games-solver • Rank 1.4 • Science 62%

An incomplete parity game solver based on graph neural networks

Updated 10 months ago

data-collections-explorer • Rank 1.4 • Science 62%

An information system focused on the engineering sciences

Updated 10 months ago

gamer • Rank 9.4 • Science 54%

R colour palettes inspired by video games

Updated 10 months ago

ztf-viewer • Rank 6.4 • Science 57%

ZTF data releases light curve viewer

Updated 10 months ago

city4cfd • Rank 6.4 • Science 57%

Reconstruction of LoD2 3D city models for urban flow simulations

Updated 10 months ago

python-stratify • Rank 6.4 • Science 57%

Vectorized interpolators for Nd atmospheric and oceanographic data

Updated 10 months ago

mem • Rank 14.4 • Science 49%

The Moving Epidemic Method R Package

Updated 10 months ago

swift • Rank 9.4 • Science 54%

Modern astrophysics and cosmology particle-based code. Mirror of gitlab developments at https://gitlab.cosma.dur.ac.uk/swift/swiftsim

Updated 10 months ago

composable-mapping • Rank 6.3 • Science 57%

PyTorch utility library for handling geometric deformations

Updated 10 months ago

pyremo • Rank 9.3 • Science 54%

python tools for remo postprocessing and maintenance

Updated 9 months ago

https://github.com/cancervariants/therapy-normalization • Rank 14.3 • Science 49%

Services and guidelines for normalizing drug and other therapy terms

Updated 10 months ago

kneed • Rank 9.3 • Science 54%

Knee point detection in Python :chart_with_upwards_trend:

Updated 10 months ago

SimBu • Rank 14.3 • Science 49%

Simulate pseudo-bulk RNAseq samples from scRNAseq expression data

Updated 10 months ago

disstans • Rank 6.3 • Science 57%

Package repository for the Decomposition and Inference of Sources through Spatiotemporal Analysis of Network Signals (DISSTANS) toolbox.

Scientific Software
Updated 10 months ago

PolaronMobility.jl — Peer-reviewed • Rank 4.3 • Science 59%

PolaronMobility.jl: Implementation of the Feynman variational polaron model - Published in JOSS (2018)

Scientific Software · Peer-reviewed
Updated 10 months ago

rudra • Rank 9.3 • Science 54%

Rust Memory Safety & Undefined Behavior Detection

Updated 10 months ago

nef-pipelines • Rank 9.3 • Science 54%

Nef tools

Updated 10 months ago

mcp-server-kubernetes • Rank 19.3 • Science 44%

MCP Server for kubernetes management commands

Scientific Software
Updated 10 months ago

Audiometry — Peer-reviewed • Rank 4.3 • Science 59%

Audiometry: A model-view-viewmodel (MVVM) application framework for hearing impairment diagnosis - Published in JOSS (2020)

Scientific Software · Peer-reviewed
Updated 10 months ago

h5rdmtoolbox • Rank 4.3 • Science 59%

Supporting a FAIR Research Data lifecycle using Python and HDF5.

Updated 10 months ago

seager19 • Rank 4.3 • Science 59%

Replication of Seager et al. (2019) Nat. Clim. Chan. They used a simple-as-possible coupled model to explain the bias in the nino3.4 trend in climate models (CMIP5). This repository replicates/reproduces their work, shows that it also applies to CMIP6, and varies some of the parameters.

Updated 10 months ago

process-wrap • Rank 19.3 • Science 44%

Wrap a Command, to spawn processes in a group or session or job object etc (successor to command-group)

Updated 10 months ago

apertium-nno-nob • Rank 6.3 • Science 57%

Apertium translation pair for Norwegian Nynorsk and Norwegian Bokmål

Updated 10 months ago

irg • Rank 6.3 • Science 57%

:package: irg is an R package for calculating the instantaneous rate of green-up.

Updated 10 months ago

paseos • Rank 9.3 • Science 54%

PASEOS - PAseos Simulates the Environment for Operating multiple Spacecraft

Updated 10 months ago

birdsongs • Rank 4.2 • Science 59%

Python packing of the physical model motor gestures to characterize and create birdsongs

Updated 10 months ago

stglib • Rank 6.2 • Science 57%

Routines used by the USGS Coastal/Marine Hazards & Resources Program to process oceanographic time-series data

Updated 10 months ago

nlraa • Rank 14.2 • Science 49%

Nonlinear Regression for Agricultural Applications

Updated 10 months ago

pyreadr • Rank 19.2 • Science 44%

Python package to read and write R RData and Rds files into/from pandas dataframes. No R or other external dependencies required.

Updated 10 months ago

patentchem • Rank 4.2 • Science 59%

Downloads USPTO patents and finds molecules related to keyword queries

Updated 10 months ago

spinnakergraphfrontend • Rank 9.2 • Science 54%

Front end for SpiNNaker software which only uses a graph

Updated 10 months ago

wasefire • Rank 19.2 • Science 44%

Secure firmware framework focusing on developer experience

Updated 10 months ago

psd • Rank 14.2 • Science 49%

Adaptive, sine-multitaper power spectral density estimation in R

Updated 10 months ago

category_theory_machine_learning • Rank 9.2 • Science 54%

List of papers studying machine learning through the lens of category theory

Updated 10 months ago

so-fronts • Rank 4.2 • Science 59%

Full scripts to generate figures for "Defining Southern Ocean fronts using unsupervised classification" https://doi.org/10.5194/os-17-1545-2021

Updated 10 months ago

nfd • Rank 9.2 • Science 54%

Named Data Networking Forwarding Daemon

Updated 10 months ago

gismo • Rank 9.2 • Science 54%

GISMO is a NLP tool to rank and organize a corpus of documents according to a query.

Updated 10 months ago

ema-workbench • Rank 14.2 • Science 49%

workbench for performing exploratory modeling and analysis

Updated 10 months ago

https://github.com/sanity/pav.rs • Rank 14.2 • Science 49%

An implementation of the Pair Adjacent Violators algorithm for isotonic regression in Rust

Updated 10 months ago

classeval • Rank 9.2 • Science 54%

Evaluation of supervised predictions for two-class and multi-class classifiers

Updated 10 months ago

visualinux • Rank 6.2 • Science 57%

A visualized debugging framework to aid in understanding the Linux kernel.

Updated 10 months ago

gsw-python • Rank 17.2 • Science 46%

Python implementation of TEOS-10 GSW based on ufunc wrappers of GSW-C

Earth and Environmental Sciences
Updated 10 months ago

fortran-error-handler • Rank 4.1 • Science 59%

Comprehensive error framework for applications requiring functional and robust error handling, utilising the power of modern object-oriented Fortran.

Updated 10 months ago

dupRadar • Rank 14.1 • Science 49%

Duplication rate quality control for RNA-Seq datasets.

Updated 10 months ago

pydov • Rank 14.1 • Science 49%

Python package to retrieve data from Databank Ondergrond Vlaanderen (DOV)

Updated 10 months ago

circrna • Rank 6.1 • Science 57%

circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data

Updated 10 months ago

csg2csg • Rank 9.1 • Science 54%

Tools to translate between different CSG geometry types

Updated 10 months ago

BUSpaRse • Rank 14.1 • Science 49%

R package to process BUS files

Updated 10 months ago

cartogram • Rank 14.1 • Science 49%

r package for cartogram creation

Updated 10 months ago

chimerax • Rank 9.1 • Science 54%

Source code for molecular graphics program UCSF ChimeraX

Updated 10 months ago

ENMTools • Rank 14.1 • Science 49%

ENMTools R Package

Updated 10 months ago

paleomat • Rank 4.1 • Science 59%

paleoMAT: Paleotemperature Reconstruction from Pollen using the Modern Analog Technique

Updated 9 months ago

https://github.com/ai-readi/fairhub-app • Rank 4.1 • Science 59%

Web platform for easily managing, curating, and sharing FAIR and AI-ready clinical and biomedical research data

Updated 10 months ago

biobb-md • Rank 9.1 • Science 54%

Biobb_md is the Biobb module collection to perform molecular dynamics simulations.

Updated 10 months ago

python-for-hydrology • Rank 6.1 • Science 57%

python and flopy tutorials for hydrologic applications and MODFLOW modeling

Updated 10 months ago

nextstrain.org • Rank 9.1 • Science 54%

The Nextstrain website