GitHub
rca
The Code for the runtime tests for the Paper "Rescue Craft Allocation in Tidal Waters of the North and Baltic Sea"
pybeach
pybeach: A Python package for extracting the location of dune toes on beach profile transects - Published in JOSS (2019)
gaunegf
Non-Equilibrium Green's Functions (NEGF) extension for the Gaussian software package using the gauopen Python interface
self-supervised-learning-for-medical-image-analysis
Code for "Evaluating Self-Supervised Learning in Medical Imaging: A Benchmark for Robustness, Generalizability, and Multi-Domain Impact". BMVC, 2025.
code_spc_ecog_stn_speech
Sample code for: Spike-phase coupling of subthalamic neurons to posterior opercular cortex predicts speech sound accuracy
https://github.com/erictleung/simplewriter
Vim plugin script to color words that are not simple like in http://xkcd.com/simplewriter/
momepy
momepy: Urban Morphology Measuring Toolkit - Published in JOSS (2019)
PressureDrop.jl
PressureDrop.jl: Pressure traverses and gas lift analysis for oil & gas wells - Published in JOSS (2019)
https://github.com/compiler-campusminden/cb-vorlesung-bachelor-w25
Lecture "Compilerbau" (B.Sc.) (Winter 2025/26)
precisecaller
A complete, scalable, easy-to-use, open-source platform for genomic variant detection in Oncology and Precision Medicine
math-base-special-nanminf
Return the minimum value of two single-precision floating-point numbers, ignoring NaN.
xtant-3_coupling_data
Two-temperature model (TTM) parameters (G, Ce, K) calculated with XTANT-3
gcs-shape
gcs is a Python library for creating generalized cylindrical shells (GCS).
lujan_etal_2023_ua_osmose
Complete set of scripts used for the UA in NHCE OSMOSE model
network_modeling
This project is my personal space to document learnings in complex systems. It's like a treasure chest filled with insights from online seminars and academic papers I've engaged with. 🎓
https://github.com/cornell-zhang/hisparse
High-Performance Sparse Linear Algebra on HBM-Equipped FPGAs Using HLS
ecophysiology-of-two-mesophotic-octocorals-code-and-data
Publicly available code utilized in analyses for manuscript 'Ecophysiology of two mesophotic octocorals intended for restoration: Effects of light and temperature' (Lange et al, in review)
mosquitosimcity_4cast
Code associated with the journal article "Mechanistic Modeling of Aedes aegypti Mosquito Habitats for Climate-informed Dengue Forecasting—Can We Improve Lead Time While Retaining Predictive Skill?"
RAFF.jl
RAFF.jl: Robust Algebraic Fitting Function in Julia - Published in JOSS (2019)
mlpro-test-center
MLPro Test Center – Howtos and benchmarking tools for MLPro components and algorithms
Optimising Light Source Positioning for Even and Flux-Efficient Illumination
Optimising Light Source Positioning for Even and Flux-Efficient Illumination - Published in JOSS (2019)
https://github.com/emptymalei/torchdyn
A PyTorch library entirely dedicated to neural differential equations, implicit models and related numerical methods
complex-contagion-model
Repository used for my Master Thesis at Potsdam Institute for Climate Impact Research, 2024/25.
gromacs-osc
Modifications to GROMACS 2021.5 to perform MD simulations in the presence of Ultrasounds
check_ssl_cert
A shell script (that can be used as a Nagios/Icinga plugin) to check an SSL/TLS connection.
https://github.com/emptymalei/streamlit-multipage-template
A template for streamlit apps. Multiple pages and utilities are structured.
hybridbackend
A high-performance framework for training wide-and-deep recommender systems on heterogeneous cluster
https://github.com/emptymalei/poster
when change the name of this repo, should check NeuPhysics/neutrino/index.rst
quantum-molecular-encodings
Data and codes used in Boy et al. (2025) - Quantum molecular structure encoding
semantic-outlier-removal
Code and data for SORE (ACL 2025), a semantic boilerplate remover.
gccb-physics-museum
This project is a reflection of `Digital-Grinnell/collectionbuilder-csv` with Physics Museum-specific content gleaned from Charlie Duke's `https://github.com/dukecld/cb-indep` repository.
hotsub
hotsub: A batch job engine for cloud services with ETL framework - Published in JOSS (2018)
survxai
survxai: an R package for structure-agnostic explanations of survival models - Published in JOSS (2018)
https://github.com/gssi/icsa2024ae
Public repository for the ICSA 2024 Paper Artifact Evaluation
mpcc.jl
Data Structures for Optimization Models with Complementarity Constraints
https://github.com/emptymalei/on-demand-shuttle
playing with the problem of on-demand shuttle
bem
bem: modeling for neutron Bragg-edge imaging - Published in JOSS (2018)
https://github.com/emptymalei/frameworks
Testing a new hugo template for "classified" entries
https://github.com/emptymalei/universities-tuition
get university tuition data using wolframalpha
https://github.com/gssi/qualitymicroart
Replication bundle of the SAC2019 paper