GitHub
object_store_tutorial
Respository with examples on how to use the JASMIN high-performance object storage
transfer-entropy-toolbox
Rewrite and extension of the research in my M.Sc. thesis for publication
collation_editor_core
This is the core of the collation editor code. It is designed to be embedded in other platforms using a services file to make the connection to the database.
exorel
A Bayesian inverse retrieval algorithm to interpret exoplanetary reflected light spectra.
shinyeducation
A website that will provide an overview of all the educational shiny apps
dna_replication_model
Toolkit for analyzing DNA replication timing, origin firing rates, and genomic stability across cell lines and chromosome regions. It includes functions for data processing and visualization for whole-genome, telomeres, centromeres, and specific genomic sites, with error analysis to highlight regions of interest.
lkgcompression
Experimental compression of the data for Looking Glass factory 3D display.
mlrl-boomer
A scikit-learn implementation of BOOMER - An Algorithm for Learning Gradient Boosted Multi-Output Rules
2025-06-04-uprrp-p
UPR Rio Piedras Software Carpentry Python Workshop - June 2025
uav_classification
Code behind "4,500 Seconds" and "15,500" Seconds. More to come
banglasenti-dataset-prep
BanglaSenti Dataset Preparation: Bangla Sentiment Analysis CSV Dataset for NLP & Machine Learning
stats-strided-dstdevpn
Calculate the standard deviation of a double-precision floating-point strided array using a two-pass algorithm.
stats-strided-dstdev
Calculate the standard deviation of a double-precision floating-point strided array.
stats-strided-sstdevch
Calculate the standard deviation of a single-precision floating-point strided array using a one-pass trial mean algorithm.
cactus-snakemake
Snakemake workflows for performing whole genome alignment with Cactus efficiently on SLURM clusters
bpftime
Userspace eBPF runtime for Observability, Network, GPU & General Extensions Framework
stats-strided-variancewd
Calculate the variance of a strided array using Welford's algorithm.
rsar
[CVPR 2025] Official implementation for the paper "RSAR: Restricted State Angle Resolver and Rotated SAR Benchmark".
stats-strided-varianceyc
Calculate the variance of a strided array using a one-pass algorithm proposed by Youngs and Cramer.
ndarray-vector-uint32
Create an unsigned 32-bit integer vector (i.e., a one-dimensional ndarray).
superpoint_transformer
Official PyTorch implementation of Superpoint Transformer introduced in [ICCV'23] "Efficient 3D Semantic Segmentation with Superpoint Transformer" and SuperCluster introduced in [3DV'24 Oral] "Scalable 3D Panoptic Segmentation As Superpoint Graph Clustering"
counterexamles-to-a-conjecture-of-faudree-and-schelp
A repository to maintian the code used to find new counterexamples to a conjecture by Faudree and Schelp
multi-ego
Set of tools to generate a multi-eGO force field to perform molecular dynamics simulations
frontiers-quarto-extension
Enhanced Quarto extension for Frontiers journal manuscripts with Harvard citation style, featuring clickable DOI links and CSL-compatible bibliography formatting
EnergyModelsGeography
Package for extending EnergyModelsX with geographical features.
@hugoalh/djb2a
An ECMAScript (JavaScript & TypeScript) module to get the non-cryptographic hash of the data with algorithm DJB2a.
data-morph-ai
Morph an input dataset of 2D points into select shapes, while preserving the summary statistics to a given number of decimal points through simulated annealing. It is intended to be used as a teaching tool to illustrate the importance of data visualization.
tutorials-early
Tutorials to learn reading, cleaning and validating case data, and converting line list data to incidence for visualizing epidemic curves.
jpwahle.com-citations
Citation helper to display stats from Google Scholar on webpage.
fermo_core
Data processing/analysis functionality of metabolomics dashboard FERMO
sally_cpv_wh
Created for benchmarking different techniques to search for CP violation in the HWW vertex in leptonic WH production.
superpredator-or-superscary
A review and meta-analysis of the effects of human interactions on animal behaviour
array-base-symmetric-filled2d-by
Create a filled two-dimensional symmetric nested array according to a provided callback function.
reducing-programs-to-objects
LaTeX paper on how to reduce programs to EO objects
batchalign_app
A front-end web app for Batchalign2, with enhancements for use by the School of Psychology at Trinity College Dublin.
sinfony
Source code for research papers about the semantic communication approach SINFONY
w2dynamics
A continuous-time hybridization-expansion Monte Carlo code for calculating n-particle Green's functions of the Anderson impurity model and within dynamical mean-field theory.
calipytion
🧑🔬 Tool for managing and analyzing data from calibration measurements for subsequent concentration calculaton