ActiSleep Tracker — Peer-reviewed • Science 93%

ActiSleep Tracker: a Python-based dashboard for adjusting automatic sleep predictions of actigraphy data - Published in JOSS (2025)

HINA — Peer-reviewed • Science 98%

HINA: A Learning Analytics Tool for Heterogenous Interaction Network Analysis in Python - Published in JOSS (2025)

calzone-tool • Science 44%

Evaluating the Calibration of Probabilistic Models

sheffieldptycho • Science 44%

MATLAB ptychography engines from Sheffield University

PANKH: An unsteady potential flow solver for hovering airfoils • Science 93%

PANKH: An unsteady potential flow solver for hovering airfoils - Published in JOSS (2025)

drugdeliverybuongiornopimplefoam • Science 54%

An OpenFOAM's solver for drug delivery and unsteady forced convection heat transfer of nanofluid using the Buongiorno model to consider nanoparticle distribution.

workshop-git • Science 44%

for the workshop on Git

elasticipy • Science 49%

A python toolkit to perform common tensor operations in Continuum Mechanics

pipelines_inmegen • Science 44%

Flujos de trabajos desarrollados y automatizados en el Intituto Nacional de Medicina Genómica para el procesamiento de datos genómicos y transcriptómicos.

eitprocessing • Science 44%

Software for electrical impedance tomography data loading, visualization and processing

hpc-intro-sanger • Science 44%

Introduction to HPC for Sanger DTP

sata • Science 67%

opensim-creator • Science 49%

A UI for building OpenSim models

obitools_workflow • Science 67%

A snakemake workflow based on the obitools suite of programs, that analyzes DNA metabarcoding data.

eoscf-autocompletion • Science 44%

PyMetric: A Geometry Informed Array Mathematics Package • Science 87%

PyMetric: A Geometry Informed Array Mathematics Package - Published in JOSS (2026)

SPAC: A Python Package for Spatial Single-Cell Analysis of Multiplexed Imaging • Science 87%

SPAC: A Python Package for Spatial Single-Cell Analysis of Multiplexed Imaging - Published in JOSS (2026)

sme-llm • Science 54%

pteridocat • Science 67%

A taxonomic database of pteridophytes

pyforce: Python Framework for data-driven model Order Reduction of multi-physiCs problEms • Science 87%

pyforce: Python Framework for data-driven model Order Reduction of multi-physiCs problEms - Published in JOSS (2026)

vkcompviz • Science 44%

Vulkan image and data processing framework capable of running a cascade of compute shaders and displaying or storing the result.

covid-19-detection-flask-app-based-on-chest-x-rays-and-ct-scans • Science 49%

constrainthg • Science 67%

General system simulation using constraint hypergraphs

tere • Science 44%

The goal of tere is to support kaimahi at Auckland Council when they work with the R programming language

pco-si-2023-2-p1-tiaw-t1-g4-mellitus • Science 44%

pco-si-2023-2-p1-tiaw-t1-g4-mellitus created by GitHub Classroom

algorithm • Science 44%

itwinai • Science 44%

Advanced AI workflows for scientific digital twins

hermes-rheo • Science 49%

Python package designed to complement and extend the piblin library, offering a set of transforms tailored for analysis of rheological data

shearconnector • Science 54%

Database containing hundreds of shear stud push-out test data

SatRbedo: An R package for retrieving snow and ice albedo from optical satellite imagery • Science 87%

SatRbedo: An R package for retrieving snow and ice albedo from optical satellite imagery - Published in JOSS (2026)

torch_blue: A Flexible Python Package for Bayesian Neural Networks in PyTorch • Science 87%

torch_blue: A Flexible Python Package for Bayesian Neural Networks in PyTorch - Published in JOSS (2026)

https://github.com/spectralmatch/spectralmatch • Science 49%

Relative radiometric normalization toolkit for raster mosaics and time series

yawarana-corpus-cldf • Science 44%

CLDF version of a Yawarana corpus

FAIRmaterials: Ontology Tools with Data FAIRification in Development • Science 87%

FAIRmaterials: Ontology Tools with Data FAIRification in Development - Published in JOSS (2026)

tools4rdf • Science 44%

Collection of tools for working with RDF data

$\mathcal{H}$-HIGNN Toolkit: A Software for Efficient and Scalable Simulation of Large-Scale Particulate Suspensions Using GNNs and $\mathcal{H}$-Matrices • Science 90%

$\mathcal{H}$-HIGNN Toolkit: A Software for Efficient and Scalable Simulation of Large-Scale Particulate Suspensions Using GNNs and $\mathcal{H}$-Matrices - Published in JOSS (2026)

cookbook-modflow • Science 44%

aiida-aimall: A Python package for automating workflows for AIMAll software • Science 87%

aiida-aimall: A Python package for automating workflows for AIMAll software - Published in JOSS (2026)

ibsc_fgh • Science 44%

Using the Fourier Grid Hamiltonian Method to describe the optical properties of Intermediate band solar cells composed of quantum wells.

bisonsite • Science 44%

Test Collection Builder Site

wecommit • Science 44%

WeCommit collaborative project

diskmags • Science 44%

Repository for the Diskmags Catalog

OnlinePCA.jl: A Julia Package for Out-of-core and Sparse Principal Component Analysis • Science 87%

OnlinePCA.jl: A Julia Package for Out-of-core and Sparse Principal Component Analysis - Published in JOSS (2026)

OnlineNMF.jl: A Julia Package for Out-of-core and Sparse Non-negative Matrix Factorization • Science 87%

OnlineNMF.jl: A Julia Package for Out-of-core and Sparse Non-negative Matrix Factorization - Published in JOSS (2026)

updatedblackmtnarchive • Science 44%

Not affiliated with Black Mountain college

twtof • Science 44%

Reader for TwH5 files

mmdet_aug • Science 44%

Reyna: A minimal overhead polytopal discontinuous Galerkin finite element library • Science 87%

Reyna: A minimal overhead polytopal discontinuous Galerkin finite element library - Published in JOSS (2026)

A Python API for OTTER • Science 87%

A Python API for OTTER - Published in JOSS (2026)

c3dr • Science 67%

Read and write C3D motion capture data in R

rydiqule • Science 75%

Rydberg Sensor Interactive Quantum Physics Module

MieSimulatorGUI: A user-friendly tool to compute and visualize light scattering by spherical dielectric particles • Science 87%

MieSimulatorGUI: A user-friendly tool to compute and visualize light scattering by spherical dielectric particles - Published in JOSS (2026)

Dyad: a binary-star dynamics and statistics library for Python • Science 87%

Dyad: a binary-star dynamics and statistics library for Python - Published in JOSS (2026)

pyfive: A pure-Python HDF5 reader • Science 92%

pyfive: A pure-Python HDF5 reader - Published in JOSS (2026)

r.earthworks • Science 67%

An add-on tool for computational terrain modeling in GRASS

BiGSTARS.jl: A Julia package for bi-global stability analysis for rotating stratified flows • Science 87%

BiGSTARS.jl: A Julia package for bi-global stability analysis for rotating stratified flows - Published in JOSS (2026)

regularizedoptimization.jl • Science 67%

Algorithms for regularized optimization

alog • Science 67%

Data logger library for the Arduino-based ALog; wtih small changes, can work on many Arduino-based systems

anvay: A Web-based Tool for Interpretive Topic Modelling in Bengali • Science 87%

anvay: A Web-based Tool for Interpretive Topic Modelling in Bengali - Published in JOSS (2026)

Htool-DDM: A C++ library for parallel solvers and compressed linear systems. • Science 92%

Htool-DDM: A C++ library for parallel solvers and compressed linear systems. - Published in JOSS (2026)

KinOpt: A Python package for chemical kinetics analysis and optimization • Science 87%

KinOpt: A Python package for chemical kinetics analysis and optimization - Published in JOSS (2026)

mmediting • Science 44%

FluxOptics.jl: A Differentiable Wave Optics Framework for Inverse Design in Julia • Science 87%

FluxOptics.jl: A Differentiable Wave Optics Framework for Inverse Design in Julia - Published in JOSS (2026)

mmdetection • Science 44%

Graphorge: An open-source forge of graph neural networks • Science 87%

Graphorge: An open-source forge of graph neural networks - Published in JOSS (2026)

tangram, an open platform for modular, real-time air traffic management research • Science 96%

tangram, an open platform for modular, real-time air traffic management research - Published in JOSS (2025)

simulist • Science 67%

An R package for simulating line lists

sbfem-with-eigenvalue-problem-derivatives-for-hydrodynamic-bearings • Science 44%

bec-ai-ethics • Science 44%

This is a small exhibition piece about the TU Berlin BEC Module - Reflection and Responsibility. The task is to make an exihibition object, and this is a small html-game about ethics and ai

eternal-domination-solver • Science 44%

A solver for the m-eternal dominating set

ochvps_sw • Science 44%

Python GUI for the octa channel HVPS

powerfactory-tools • Science 75%

A Python toolbox for the (external) control of DIgSILENT PowerFactory.

times_model • Science 23%

The Integrated MARKAL-EFOM System (TIMES) - a bottom-up optimization model for energy-environment systems

yolov5pruning • Science 54%

yolov5 pruning with attention transform and soft target loss

p5-design-of-a-cracksealing-parallel-robot • Science 44%

baysc: An R package for Bayesian survey clustering • Science 87%

baysc: An R package for Bayesian survey clustering - Published in JOSS (2026)

magnetometry • Science 67%

Magnetometry

scheduling_model • Science 44%

biodiscvr: Biomarker Discovery Using Composite Value Ratios • Science 87%

biodiscvr: Biomarker Discovery Using Composite Value Ratios - Published in JOSS (2026)

Napari-3D-Counter: A manual cell counter for napari • Science 87%

Napari-3D-Counter: A manual cell counter for napari - Published in JOSS (2026)

text-to-seepch • Science 54%

PySGN: A Python package for constructing synthetic geospatial networks • Science 87%

PySGN: A Python package for constructing synthetic geospatial networks - Published in JOSS (2026)

pandemic-immigrant-mortality • Science 44%

Replication kit for "Immigrant Mortality Advantage in the United States during the First Year of the COVID-19 Pandemic" in Demographic Research

smaesh-challenge • Science 44%

Framework for the side-channel challenge of the SMAesH implementation

evoxels: A differentiable physics framework for voxel-based microstructure simulations • Science 87%

evoxels: A differentiable physics framework for voxel-based microstructure simulations - Published in JOSS (2026)

navier-stokes-nitsche-vms • Science 44%

Code used for developing the simulations in arXiv:2307.03589

OptiGob: A decision support tool for Agriculture, Forestry and Other Land Use transitions • Science 87%

OptiGob: A decision support tool for Agriculture, Forestry and Other Land Use transitions - Published in JOSS (2026)

multi-agent_with-ollama • Science 44%

Tissue Data Explorer: a website template for presenting tissue sample research findings • Science 95%

Tissue Data Explorer: a website template for presenting tissue sample research findings - Published in JOSS (2026)

fiboservice • Science 67%

FiboService is a service for calculating fibonacci numbers using matrix multiplication. I'm working on this simple project to improve as a programmer.

targene-pipeline • Science 44%

Nextflow pipeline for Targeted-Learning of genetic effects

lcgp • Science 44%

Latent component Gaussian process, an emulator strategy for multivariate stochastic simulations.

vigilant-octo-system • Science 54%

SkyRank: a unified toolkit for Skyline ranking, benchmarking, and visualization • Science 87%

SkyRank: a unified toolkit for Skyline ranking, benchmarking, and visualization - Published in JOSS (2026)

etl-forge • Science 54%

ParaDigMa: a Python toolbox for extracting Parkinson's disease digital biomarkers from daily life wrist sensor data • Science 92%

ParaDigMa: a Python toolbox for extracting Parkinson's disease digital biomarkers from daily life wrist sensor data - Published in JOSS (2026)

rmcmc • Science 57%

Robust Markov chain Monte Carlo methods in R

hzlamem • Science 67%

heatzone, TDk, and OG LaMEM

number-cruncher • Science 44%

A revolutionary new product

datatidy24sta5069z • Science 44%

Tidy data for analysis for STA5069Z course