GitHub

https://github.com

Updated 10 months ago

magpie • Science 67%

Graphical linear spin-wave calculator.

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assesspool • Science 57%

nextflow-enabled version of assessPool radseq processing pipeline

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polytunnel-pv • Science 54%

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adaptive-nthash • Science 44%

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amuse • Science 49%

Astrophysical Multipurpose Software Environment. This is the main repository for AMUSE

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fhir-pyrate • Science 67%

FHIR-PYrate is a package that provides a high-level API to query FHIR Servers for bundles of resources and return the structured information as pandas DataFrames. It can also be used to filter resources using RegEx and SpaCy and download DICOM studies and series.

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mia • Science 49%

Modular, object-based analysis for ImageJ/Fiji

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vam • Science 49%

Vortex-Æther-Model paper

Updated 8 months ago

https://github.com/dendroulab/panpipes-tutorials • Science 13%

tutorials to run panpipes

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diffusion_one • Science 44%

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https://github.com/dendroulab/taurus_paper • Science 13%

Code for the TAURUS study

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niaarmts • Science 67%

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template-uv-python-research-software • Science 75%

A template for Pythonic research software with environment management through uv.

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teachanddraw • Science 44%

A canvas based drawing library and 2d game engine designed purely for teaching an introductory level set of content. Focus is on a smaller command set so students will be able to get familiar with the library quicker.

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environmental-insights • Science 57%

Code Repository for Environmental Insights, a python package for the accessing and analytics of ambient air pollution concentration data.

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environmental-insights-interactive • Science 44%

Frontend Website for Environmental Insights package

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dh2025 • Science 75%

Repository containing the data and code for our short paper on the novel beginning study presented at DH2025 in Lisbon

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rowrap.js • Science 44%

Javascript/Typescript Roblox API wrapper.

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urban-change-google-25d • Science 67%

Python and Google Earth Engine workflows for detecting and classifying urban change using Google’s Open Buildings 2.5D Dataset, with a focus on informal settlements in Nairobi. Includes scripts for processing, typology classification, slum-level validation prep, and city-scale spatial analysis.

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torchtools • Science 44%

Helpful PyTorch models and data-loading tools

Updated 8 months ago

https://github.com/dendroulab/photizo • Science 10%

Spectroscopy analysis package

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gallery • Science 44%

Posadas Gallery

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lmeval-test • Science 49%

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polygotscripts • Science 44%

A single executable script format that is operable in both UNIX and WINDOWS environment.

Updated 8 months ago

https://github.com/dendroulab/panpipes-benchmarks • Science 13%

code used to run panpipes benchmarks

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nullable • Science 44%

The Nullable Monad

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dfg-fachsystematik-ontology • Science 57%

DFG Fachsystematik Ontology - DFG Classification of Scientific Disciplines, Research Areas, Review Boards and Subject Areas

Updated 10 months ago

gen_surv • Science 44%

gen_surv is a Python package for simulating survival data under a variety of models, inspired by the R package genSurv

Updated 10 months ago

scalebaron • Science 44%

Python toolkit for composite visualization and scaling of elemental imaging data

Updated 10 months ago

candlewick • Science 44%

A cross-platform real-time 3D renderer for robotics powered by SDL3-gpu

Updated 10 months ago

paracetamol-for-aki-parist-trial-work-flow • Science 67%

Comprehensive, end-to-end R and R Markdown pipeline for the PARIST trial, covering raw data cleaning, RMST-based time-to-recovery analyses, biomarker trajectories, hepatotoxicity safety checks, and fully reproducible manuscript generation with CI automation.

Updated 10 months ago

dedalus • Science 54%

A flexible framework for solving PDEs with modern spectral methods.

Updated 10 months ago

renee • Science 67%

A comprehensive quality-control and quantification RNA-seq pipeline

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kube-burner • Science 44%

Kubernetes performance and scale test orchestration framework written in golang

Updated 10 months ago

nfpracticum • Science 44%

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jae_leach-et-al • Science 44%

data associated with publication, Does IPPM bear fruit? Evaluating reduced-risk insecticide programs on pests, pollinators, and marketable yield

Updated 10 months ago

pyjedai-spark • Science 44%

An open-source extension of the PyJedAI framework, integrating Apache Spark (PySpark) to scale Entity Resolution workflows for large datasets

Updated 10 months ago

ToQUBO • Science 67%

🟦 JuMP ToQUBO Automatic Reformulation

Updated 10 months ago

el_dar • Science 67%

Экспериментальный перевод на испанский романа «Дар» Владимира Набокова

Updated 10 months ago

cariboulocprep • Science 44%

Data prep modules to clean and harmonize the raw data from each jurisdiction. Additionally provides a study area for subsequent caribou analysis modules.

Updated 9 months ago

csle-agents • Science 49%

A research platform to develop automated security policies using quantitative methods, e.g., optimal control, computational game theory, reinforcement learning, optimization, evolutionary methods, and causal inference.

Updated 9 months ago

shell-novice • Science 44%

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eeg-pype • Science 54%

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perryoedemo • Science 44%

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epic_ls • Science 44%

EPIC Tikhonov Regularization for Least Squares Inversion

Updated 10 months ago

typesecure • Science 44%

A focused TypeScript cryptography package that provides secure encryption and hashing utilities with strong typing and runtime validation using Zod.

Updated 10 months ago

mcclintock • Science 67%

Meta-pipeline to identify transposable element insertions using next generation sequencing data

Updated 9 months ago

gitma-canspin • Science 75%

A gitma package version adapted to the needs of the CANSpiN project

Updated 10 months ago

object-every-in-by • Science 44%

Test whether all properties (own and inherited) of an object pass a test implemented by a predicate function.

Updated 10 months ago

force-lx • Science 44%

Public version of ForCE-LX

Updated 9 months ago

onesentence • Science 75%

A pre-commit check for semantic line breaks.

Updated 10 months ago

getgenomes • Science 44%

Download genomes from databases on a cluster

Updated 10 months ago

vitalsigns • Science 44%

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analyzeaudio • Science 44%

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assert-is-equal-uint8clampedarray • Science 44%

Test if two arguments are both Uint8ClampedArrays and have equal values.

Updated 10 months ago

coast • Science 75%

A Coastal Ocean Assessment Tool built as an extendable python framework for nemo models

Updated 10 months ago

constrained-variable • Science 44%

A C++23 header-only library for type-safe variable constraints with support for validation, transformation, and clear error reporting.(使用C++23开发的头文件库,支持类型安全的变量约束,包括校验、转换和清晰的错误报告。)

Updated 10 months ago

india-isin-data • Science 67%

International Securities Identification Numbers for various Indian Securities

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data-formats • Science 54%

Protobuf file format definitions

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blas-ext-base-ndarray-sindex-of • Science 44%

Return the first index of a specified search element in a one-dimensional single-precision floating-point ndarray.

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blas-ext-base-ndarray-glast-index-of • Science 44%

Return the last index of a specified search element in a one-dimensional ndarray.

Updated 10 months ago

stats-strided-dsemyc • Science 57%

Calculate the standard error of the mean for a double-precision floating-point strided array using a one-pass algorithm proposed by Youngs and Cramer.

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array • Science 57%

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pyani-plus • Science 67%

Development repo for pyani-plus (the next iteration of pyani)

Updated 10 months ago

stats-strided-dsemch • Science 57%

Calculate the standard error of the mean for a double-precision floating-point strided array using a one-pass trial mean algorithm.

Updated 10 months ago

community • Science 44%

Stylescape | Community Resources

Updated 10 months ago

sixarm_debian_postgresql_packages • Science 44%

SixArm.com » Debian » PostgreSQL packages for databases

Updated 10 months ago

smoreglos • Science 67%

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stringinator • Science 44%

Find the most popular, longest and frequent strings and characters

Updated 10 months ago

minchoc • Science 44%

Minimal Chocolatey-compatible NuGet server in a Django app.

Updated 10 months ago

ndarray-base-some-by • Science 44%

Test whether at least `n` elements in an ndarray pass a test implemented by a predicate function.

Updated 10 months ago

predatory_oa • Science 44%

Notes for a training session for Doctoral Students : how to avoid predatory open access publishers

Updated 10 months ago

rdm-guidelines • Science 44%

This is the repository for SciLifelab Research Data Management (RDM) guidelines, a central resource to provide information about data management.

Updated 10 months ago

carl_tf_test • Science 54%

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matplot • Science 44%

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c • Science 54%

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verisnip-tool • Science 44%

My Verilog Template is a project that I will be working on my free time. The project aim is to compile and elaborate Verilog modules. The Verilog cores are written in traditional Verilog and might use `include "file" to add automaticaly generated code.

Updated 10 months ago

isopredict • Science 44%

A program for training, testing, and applying isotopic models for region-of-origin prediction in Latin America.

Updated 10 months ago

constants-float32-max-safe-nth-double-factorial • Science 44%

Maximum safe nth double factorial when stored in single-precision floating-point format.

Updated 10 months ago

engine-framework • Science 67%

The repository of the EnGINE framework used for reproducible large scale experiments.