GitHub
https://github.com/google-deepmind/spectral_inference_networks
Implementation of Spectral Inference Networks, ICLR 2019
imageomics-guide
Imageomics-focused guide to collaborative work, including GitHub and Hugging Face workflows.
ivonesamplemr
Stata package for one-sample Mendelian randomization / instrumental variable analyses
h2-opt-st-interp-num
Numerical examples of interpolatory necessary H2-optimality conditions for structured linear systems
labelbuddy-annotations
Annotations of academic papers. The papers were likely gathered using pubget, and the annotations made with labelbuddy
polyglot-scholarvault-20250722_175405
Auto-exported from VibeSheet for idea 1256
phosphine-sproj
Contains all of the supplementary data useful for my Senior Project on the spectrum of the Phosphine molecule.
NonparametricVI
Particle-based and nonparametric variational methods for approximate Bayesian inference and Probabilistic Programming
wrfchem-install-script-linux-64bit
Self install tool for the Weather Research Forecasting Model (WRF) CHEM, on 64bit
ipf-sonification-pd
Three different PD scripts for real-time synthesis using the Impulse Pattern Formulation (IPF)
cnd/ddd-maker-bundle
A Symfony bundle that automates the generation of Domain-Driven Design (DDD) code artifacts, including commands, queries, handlers, controllers, API documentation, tests, and more. This bundle provides console commands to quickly scaffold DDD classes for your Symfony projects, following the CQRS (Command Query Responsibility Segregation) pattern.
phyloref
PhyloRef: A Snakemake-Based Workflow for Semi-Automated Reference Library Curation via Phylogenetic Anomaly Detection
pypackit
Cloud-Native Continuous Software Engineering Automation for Python Packages on GitHub
diffmethseq
A NextFlow pipeline to perform differential methylation analysis from bismark-aligned files
MDL Suite
MDL Suite: A language, generator and compiler for describing mazes - Published in JOSS (2020)
ExtendedRtIrtModeling
Extended Response Time Item Response Models with Polya-Gamma Sampler and Bayesian Quantile Regression.
vcf-reformatter
🧬 High-performance VCF file parser and reformatter with VEP annotation support. Converts complex VCF files to analyzable TSV format with intelligent transcript handling.
selenium-examples-using-rust
Selenium browser automation examples using Rust programming
h3_indicators
Notebooks and documentation about computing H3 biodiversity indicators
eval_phenoflex
A bundle of evaluation functions I use when working with phenoflex
2025-10-21-cldt-part1-online
Collaborative Lesson Development Training Part 1: 21-24 October 2025
orthology_map
orthology_map is a pipeline designed to integrate suite of orthology assignment tools to contribute in a consensus based scoring algorithm
cramming
Cramming the training of a (BERT-type) language model into limited compute.
ai_requirements_generation_rr
This repository accompanies the paper “A Case Study on Cyber‑Security Requirement Elicitation: Leveraging Large‑Language‑Model Capabilities.” It contains every script, dataset, prompt template and result needed to fully reproduce our empirical study.
machine-learning-novice-sklearn
A Carpentry style lesson on machine learning with Python and scikit-learn.
partimode
Modeling Particle Movement and Destruction in the sediment surface mixed layer.
wurzburg-glosses-extraction
Extracts lemmata, forms and loci from the Würzburg glosses
guides-ads-marinesurvey
Source files for the ADS Guide to Good Practice on Marine Survey
fasttomo
Master's thesis project consisting in the development of a pipeline to segment and render tomography data of lithium-ion batteries during abuse testing.
icesee
A state-of-the-art data assimilation software package for coupling ice sheet models.
discontinuouslcs
Data, Python scripts and Results used in the publication entitled "Data-Error Scaling in Machine Learning on Natural Discrete Combinatorial Mutation-prone Sets: Case Studies on Peptides and Small Molecules"
scflvdj
scflvdj is a bioinformatics pipeline to analyze single cell TCR and BCR data.
nomad
Code for Nonlinear Manifold Alignment with Dynamics (NoMAD) detailed in Karpowicz et al., in press
https://github.com/dineshpinto/awesome-tee-blockchain
A curated list of resources for learning about Trusted Execution Environments (TEEs) in the context of blockchains.
