GitHub
https://github.com/emptymalei/streamlit-multipage-template
A template for streamlit apps. Multiple pages and utilities are structured.
check_ssl_cert
A shell script (that can be used as a Nagios/Icinga plugin) to check an SSL/TLS connection.
gromacs-osc
Modifications to GROMACS 2021.5 to perform MD simulations in the presence of Ultrasounds
complex-contagion-model
Repository used for my Master Thesis at Potsdam Institute for Climate Impact Research, 2024/25.
https://github.com/emptymalei/torchdyn
A PyTorch library entirely dedicated to neural differential equations, implicit models and related numerical methods
mlpro-test-center
MLPro Test Center – Howtos and benchmarking tools for MLPro components and algorithms
mosquitosimcity_4cast
Code associated with the journal article "Mechanistic Modeling of Aedes aegypti Mosquito Habitats for Climate-informed Dengue Forecasting—Can We Improve Lead Time While Retaining Predictive Skill?"
ecophysiology-of-two-mesophotic-octocorals-code-and-data
Publicly available code utilized in analyses for manuscript 'Ecophysiology of two mesophotic octocorals intended for restoration: Effects of light and temperature' (Lange et al, in review)
network_modeling
This project is my personal space to document learnings in complex systems. It's like a treasure chest filled with insights from online seminars and academic papers I've engaged with. 🎓
lujan_etal_2023_ua_osmose
Complete set of scripts used for the UA in NHCE OSMOSE model
gcs-shape
gcs is a Python library for creating generalized cylindrical shells (GCS).
xtant-3_coupling_data
Two-temperature model (TTM) parameters (G, Ce, K) calculated with XTANT-3
math-base-special-nanminf
Return the minimum value of two single-precision floating-point numbers, ignoring NaN.
precisecaller
A complete, scalable, easy-to-use, open-source platform for genomic variant detection in Oncology and Precision Medicine
https://github.com/compiler-campusminden/cb-vorlesung-bachelor-w25
Lecture "Compilerbau" (B.Sc.) (Winter 2025/26)
code_spc_ecog_stn_speech
Sample code for: Spike-phase coupling of subthalamic neurons to posterior opercular cortex predicts speech sound accuracy
self-supervised-learning-for-medical-image-analysis
Code for "Evaluating Self-Supervised Learning in Medical Imaging: A Benchmark for Robustness, Generalizability, and Multi-Domain Impact". BMVC, 2025.
gaunegf
Non-Equilibrium Green's Functions (NEGF) extension for the Gaussian software package using the gauopen Python interface
IDEAS
Modelica library allowing simultaneous transient simulation of thermal and electrical systems at both building and feeder level.
magicbathynet
Quick start guide for benchmarking MagicBathyNet dataset in learning-based bathymetry and pixel-based classification using Remote Sensing imagery.
olivaw
Python framework for Agile ontology development support to be used with command lines with pre-commit or GitHub Actions
quantifyingwaveattenuation
Data and scripts to accompany Pinsky et al. 2013 Ecosphere doi: 10.1890/ES13-00080.1
https://github.com/icecube/alertstack
Code to test correlations of catalogues and neutrino alerts
mapai
An R package for Supervised Learning for Positional Accuracy Improvement of Vector Maps
nmrprocflow
An efficient GUI tool for spectra processing from 1D NMR metabolomics data (https://nmrprocflow.org)
treeminhash
TreeMinHash: Fast Sketching for Weighted Jaccard Similarity Estimation
ethernet-packet-generator-hardware-prototype
A basic ethernet packet generator hardware prototype description in Verilog-HDL
multi_modal_swarm_rag
Adaptive Swarm Retrieval: A Hierarchical Agent-Based Approach for Blind and Stateful Information Retrieval
foodclim
🍽️ Food Yield Responses to Climate Change in NetLogo
hsombehaviorsuite
Contains behavioral control files for use with MATLAB 2021B+ and Arduino
