GitHub
master-thesis
Master Thesis - Exploration and (further) development of an alternative navigation paradigm to promote critical evaluation skills in the use of user interfaces
lymph-model
Python package for statistical modelling of lymphatic metastatic spread in head & neck cancer.
nl_pwl_optimization
Optimization over Non-Linear Non-Convex functions: a linearization approach
reich_potential_ddis_nhs
Reich et al. - Prevalence and Duration of Potential Drug Interactions Among US Nursing Home Residents, 2018-2020
mxene-ceramic-adhesion
DFT + ML framework for MXene–ceramic interfacial adhesion
navigate-companion-framework
Official methodology for the Navigate Support Companions — a framework for ethical, AI-powered emotional support tools. Grounded in over 160 books, clinical thinking, and real-world prompt analysis.
romlimes
Repository with reproducible analyses from 2023 related to: Visser, R.M., 2015. Imperial timber? Dendrochronological evidence for large-scale road building along the Roman limes in the Netherlands. Journal of Archaeological Science 53, 243–254. doi:10.1016/j.jas.2014.10.017
braph-2
BRAPH 2.0 is a comprehensive software package for the analysis and visualization of brain connectivity data, offering flexible customization, rich visualization capabilities, and a platform for collaboration in neuroscience research.
dinocut
A image processing pipline for object detection using Grounding Dino, SAM, and BG Cut
bacannot
Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.
qugradlab
An extension to the Python package QuGrad that implements common Hilbert space structures, Hamiltonians, and pulse shapes for quantum control.
publication-figure-retrieval
This tool provides a method for retrieving publication figure images from NIH's Entrez API based on a list of species.
kalamari
:octopus: A curated database of completed assemblies with taxonomy IDs
wnstatmech
Python package to compute the thermodynamics of fermions and bosons.
service-finder
A program to monitor and find dns-sd services in the network. Printing IP and name.
2024_kdvh_rr
Code to reproduce experiments in paper on hyperbolic relaxation of KdV equation.
ogd-api-data
Repository for the on-demand event/feature-access API for OpenGameData
notebook-template
Notebook template repository for making research code deposit in an academic repository and DOI mining with Zenodo
RHEOS.jl -- A Julia Package for Rheology Data Analysis
RHEOS.jl -- A Julia Package for Rheology Data Analysis - Published in JOSS (2019)
stats-base-ztest-one-sample-results-float64
Create a one-sample Z-test double-precision floating-point results object.
cldla
workflow to identify QTLs using mixed linear models and variance component estimation
gcd-biologic
Python script to read and plot galvanostatic charge-discharge data from Biologic equipment.
random-array-beta
Create an array containing pseudorandom numbers drawn from a beta distribution.
fastapi-neo4j
Template for building FastAPI applications with Neo4j(neontology).
entropic-spacetime-framework
repo.host("ESF manuscript"); type="meta-theoretical proposal"; goal="unify physics & emergent complexity"; fields=; mechanism="resonant coupling"; addresses=; speculates=["consciousness", "QC", "life"]; status="living document"; updates=["derivations", "simulations", "feedback"]; invite_collaborators(["physics", "cosmology", "neuroscience", "AI"]).
optiwingairfoilsdatabase
This repository contains the database of airfoils utilized in the project titled "Gradient-Based Regularization for Inverse Airfoil Design" conducted in IIT Madras during the period 2023-24. This database has been obtained from the open-source contribution at the UIUC Airfoil Data Site. The authors do not claim ownership of this data.
eu-zevam
This repository presents a European passenger car stock model. It allows to model the future powertrain composition of the European vehicle fleet under different scenarios. It also presents different sensitivity analysis performed. This code is used to analyze the European BEV stock fleet up to 2050.
nf-platypusindelcalling
This page is reserved for NextFlow based Indell Calling Workflow (with Platypus) from DKFZ
cherita-flask-api
A web service designed to provide a robust and scalable interface for managing and analyzing biological data
https://github.com/dmey/elefridge.jl
Compressing atmospheric data into its real information
phosphofind
PhosphoFind provides functions to identify phosphorylation positions (aminoacid number in proteins) in phosphoproteomics experiments.
neuroUp
neuroUp: Plan Sample Size for fMRI Regions of Interest research using Bayesian updating
oakville-land-use-classification
Optimizing Deep Learning Models for Classifying Urban Land Cover.
ducted-hydrokinetic-turbine-key-files
Key files for ducted hydrokinetic turbine optimization/re-evaluation