GitHub

https://github.com

Updated 10 months ago

multisyn • Science 67%

Drug Combination Prediction, Anti-cancer joint prediction algorithm based on multi-source data

Updated 10 months ago

extended_finite_state_machine_inference • Science 44%

Local mirror of the Archive of Formal Proof (AFP) entry "Extended_Finite_State_Machine_Inference".

Updated 10 months ago

opticka • Science 67%

Opticka is an experiment manager built on top of the Psychophysics toolbox (PTB) for MATLAB. It runs experimental tasks using flexible state machine logic and easily does dynamic methods-of-constants type experiments with full behavioural control. It uses a class system to create simple to use visual stimuli using experimenter friendly units. Opticka can use an Eyelink eyetracker, Plexon Omniplex neurophysiology data collection and general TTL control using either a cheap LabJack (ms precision) or DataPixx/Display++ (µs precision). It contains analysis routines linked to Fieldtrip for spike and LFP data easily parsed in terms of the experimental variables.

Updated 10 months ago

tekst • Science 65%

A collaborative research platform for resources on natural language texts

Updated 10 months ago

dgtd • Science 44%

Maxwell's curl equations solver using discontinuous Galerkin methods.

Updated 10 months ago

constellation • Science 67%

The Autonomous Control and Data Acquisition System for Dynamic Experimental Setups

Updated 10 months ago

dataplan • Science 54%

DataPLAN is a Data Management Plan (DMP) generator developed by DataPLANT

Updated 10 months ago

tikhonovrelaxationspectra • Science 44%

Generate relaxation spectra from transient stress relaxation data via Tikhonov regularization.

Updated 10 months ago

stats-strided-nanmin-by • Science 44%

Calculate the minimum value of a strided array via a callback function, ignoring NaN values.

Updated 10 months ago

stats-strided-nanmax-by • Science 44%

Calculate the maximum value of a strided array via a callback function, ignoring NaN values.

Updated 10 months ago

stats-strided-min-by • Science 44%

Calculate the minimum value of a strided array via a callback function.

Updated 10 months ago

stats-strided-max-by • Science 44%

Calculate the maximum value of a strided array via a callback function.

Updated 10 months ago

simspad • Science 57%

A high performance avalanche multiplication based optical receiver simulator.

Updated 10 months ago

mri-on-bear-edu • Science 57%

Repository for the Magnetic Resonance Imaging in Cognitive Neuroscience (MRICN) course, University of Birmingham

Updated 10 months ago

stress-ng • Science 44%

Updated 10 months ago

cv • Science 44%

My curriculum vitae

Updated 10 months ago

dbscan • Science 57%

DBSCAN for multi-hazard spatio-temporal footprint analysis

Updated 10 months ago

2025-07-15-geospatialr • Science 44%

Website repository for the Introduction to Geospatial Raster and Vector Data with R Workshop held on 15/07/2025

Updated 10 months ago

zooe • Science 44%

Source code for zooe website

Updated 10 months ago

stats-strided-smaxabs • Science 44%

Calculate the maximum absolute value of a single-precision floating-point strided array.

Updated 10 months ago

urbaneats • Science 44%

Updated 10 months ago

template • Science 44%

Repository for Template

Updated 10 months ago

graphg • Science 54%

GraphGen: Enhancing Supervised Fine-Tuning for LLMs with Knowledge-Driven Synthetic Data Generation

Updated 10 months ago

citation-explorer • Science 44%

Python file to calculate a cumulative citation numbers using InspireHEP API

Updated 10 months ago

lang-sma • Science 44%

Finite state and Constraint Grammar based analysers and proofing tools, and language resources for the Southern Sami language

Updated 10 months ago

spynnakernewmodeltemplate • Science 44%

Model templates for use with the sPyNNaker8 project

Updated 10 months ago

eel-meta-analysis • Science 57%

Silver eel meta analysis

Updated 10 months ago

context-engineering • Science 44%

🧠 Context Engineering is an open-source toolkit to visualize, test, and optimize how LLMs process context windows. Includes a Streamlit app, RAG simulation, educational docs, and Docker support—perfect for prompt engineers, researchers, and AI developers.

Scientific Software
Updated 10 months ago

Groupyr — Peer-reviewed • Science 93%

Groupyr: Sparse Group Lasso in Python - Published in JOSS (2021)

Economics (40%)
Scientific Software · Peer-reviewed
Updated 10 months ago

crawl • Science 44%

Updated 10 months ago

energymodelsflex.jl • Science 67%

Package with nodal descriptions for flexibility in industrial modelling.

Updated 10 months ago

eaglevision • Science 54%

EagleVision: Object-level Attribute Multimodal LLM for Remote Sensing

Updated 10 months ago

https://github.com/bytedance/pxmeter • Science 49%

Structural Quality Assessment for Biomolecular Structure Prediction Models

Updated 10 months ago

pcir • Science 57%

Developing a R package called ‘Potential for Conflict Index - PCI’, which is a descriptive statistical method used to enhance the understanding of outcomes in human dimensions research. The package will equip users with the tools required for calculating, comparing, and graphing the potential for conflict.

Updated 10 months ago

workflow • Science 44%

workflow for health suetra

Updated 10 months ago

dynamispectra • Science 67%

DynamiSpectra: Decode molecular motion with precision and power

Updated 10 months ago

mlann • Science 44%

A Multilabel Classification Framework for Approximate Nearest Neighbor Search

Updated 10 months ago

curvometria-gdctg- • Science 44%

Repositório oficial com códigos, artigos e simulações da Curvometria e GDCGT

Updated 10 months ago

aais25_content • Science 44%

Updated 10 months ago

stats-array-variancepn • Science 44%

Calculate the variance of an array using the stats-array-variancepn library. Ideal for numerical and scientific computation in JavaScript. 🚀📊

Updated 10 months ago

yolo8_new • Science 54%

Updated 10 months ago

download_itrdb • Science 44%

Updated 10 months ago

chaosmagpy • Science 67%

ChaosMagPy is a simple Python package for evaluating the CHAOS geomagnetic field model and other models of Earth's magnetic field.

Updated 10 months ago

capymoa • Science 54%

Enhanced machine learning library tailored for data streams, featuring a Python API integrated with MOA backend support. This unique combination empowers users to leverage a wide array of existing algorithms efficiently while fostering the development of new methodologies in both Python and Java.

Updated 10 months ago

annie • Science 57%

ANNIE - Annotation Interface for Named-entity & Information Extraction

Updated 10 months ago

st4sd-deployment • Science 44%

Helm chart to deploy the Simulation Toolkit for Scientific Discovery on OpenShift

Updated 10 months ago

vaper • Science 44%

Viral (meta)-genome assembly pipeline.

Updated 10 months ago

aws-cfn-empty-template-stacks • Science 44%

Using the WaitConditionHandle to construct CloudFormation stacks without AWS resources

aws
Updated 10 months ago

shocktrackinglibrary • Science 49%

Image processing library to detect and track shock waves from Schlieren images using line-scanning technique. The library uses OpenCV, scipy, glob, sys, numpy and matplotlib libraries .

Updated 10 months ago

website • Science 44%

UseGalaxy.EU website (compiled version https://github.com/usegalaxy-eu/usegalaxy-eu.github.io)

Updated 10 months ago

mstinn • Science 57%

MSTinn stands for Methylation Sequencing TAPS by Innovation Lab

Updated 10 months ago

charmark-biomarker-discovery • Science 67%

Python toolkit for character-level Markov modeling and linguistic biomarker discovery in dementia

Updated 10 months ago

4cat • Science 49%

The 4CAT Capture and Analysis Toolkit provides modular data capture & analysis for a variety of social media platforms.

Updated 10 months ago

flux-tutorials • Science 67%

The Flux Tutorials! But not official, this is a Dinosaur Tutorial series. :t-rex:

Updated 10 months ago

gyselalibxx • Science 98%

Gyselalib++ is a collection of C++ components for writing gyrokinetic semi-lagrangian codes and similar

Updated 10 months ago

rsp_mix • Science 67%

Create cosmochemical mixtures of r-process, s-process, and p-process reservoirs

Updated 10 months ago

feg-lab.github.io • Science 44%

Functional and evolutionary genomics lab website

Updated 10 months ago

slim • Science 77%

Interoperable web-based DICOM slide microscopy viewer and annotation tool

Updated 10 months ago

lang-kio • Science 44%

Finite state and Constraint Grammar based analysers and proofing tools, and language resources for the Kiowa language

Updated 9 months ago

https://github.com/demichie/mrlavaloba • Science 13%

Stochastic model for lava flows

Updated 10 months ago

redcap-embedded-pdf • Science 44%

Provides the @EMBEDDEDPDF action tag to REDCap

Updated 10 months ago

volatility3 • Science 44%

Volatility3 packaging for Hydra

Updated 10 months ago

quasinewton.jl • Science 67%

A collection of Newton-type optimization algorithms implemented in Julia.

Updated 10 months ago

lang-ale • Science 44%

Finite state and Constraint Grammar based analysers and proofing tools + language resources for Aleut

Updated 10 months ago

https://github.com/cornell-zhang/apu-micro25-artifact • Science 57%

Artifact of MICRO'25 paper Characterizing and Optimizing Realistic Workloads on a Commercial Compute-in-SRAM Device

Updated 10 months ago

lang-som • Science 44%

Finite state and Constraint Grammar based analysers and proofing tools, and language resources for the Somali language

Updated 10 months ago

lang-ces • Science 44%

Finite state and Constraint Grammar based analysers and proofing tools, and language resources for the Czech language

Updated 10 months ago

lang-mdf • Science 57%

Finite state and Constraint Grammar based analysers and proofing tools, and language resources for the Moksha language

Updated 10 months ago

book • Science 44%

Documentation on how to use the Rust Programming Language to develop firmware for bare metal (microcontroller) devices

Updated 10 months ago

speclite • Science 67%

Lightweight utilities for working with spectroscopic data

Updated 10 months ago

xlstm-mixer • Science 54%

Updated 10 months ago

code-translator • Science 44%

Web Application for code-to-code generation

Updated 10 months ago

qole • Science 57%

An easy-to-use simulator for Quantum Circuits for JavaScript, based on Quantum Multiple-Valued Decision Diagrams.

Updated 10 months ago

omics-exercises • Science 44%

Extra materials or datasets for single-cell RNA-seq teaching

Updated 10 months ago

holmgenome • Science 44%

Updated 10 months ago

oncosharp • Science 44%

Updated 10 months ago

intelliperf • Science 67%

Automated bottleneck detection and solution orchestration

Updated 10 months ago

pyet • Science 67%

:sunflower: pyet is a Python package to estimate reference and potential evaporation.

Updated 10 months ago

2025-09-22-hida-online • Science 44%

Course website for the HIDA workshop on Shell and Git on September 22 and 23, 2025

Updated 10 months ago

bafe-net • Science 54%