GitHub

https://github.com

Updated 6 months ago

viralassembly • Science 57%

Assemble and QC viral reads with a reference scheme

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@stdlib/blas-base-transpose-operation-resolve-str • Science 44%

Return the transpose operation string associated with a supported BLAS transpose operation value.

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qiskit-serverless • Science 44%

A programming model for leveraging quantum and classical resources

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diffilqrax • Science 67%

Diffilqrax is an open-source Python library for differentiable iLQR and LQR in JAX

Updated 6 months ago

montejo-kovacevich-lab-website • Science 44%

Source code for montejo-kovacevich-lab website

Updated 6 months ago

haploidsprucemap • Science 44%

Scripts and data input files for Norway spruce genetic maps from haploid megagametophyte data. Maps and results are presented in Bernhardsson et al. (2018). "An ultra-dense haploid genetic map for evaluating the highly fragmented genome assembly of Norway spruce (Picea abies) "

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hydropower-fatigue-damage-reduction • Science 44%

Code for EPFL PTMH & SDSC's paired-hydro project

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creepyhdr • Science 44%

Repository for new guide site

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pid4cat-model • Science 49%

Handle-based PIDs with a rich LinkML metadata model for resources in catalysis (PID4Cat)

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spectacoular • Science 44%

Extension module for Acoular for the realization of microphone array GUI applications with minimal programming effort.

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task-assignment-robotic-warehouse • Science 44%

Multiagent RL Open Project

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portal-admin • Science 44%

Sistema de gerenciamento de orçamentos, solicitações de serviços, fornecedores e clientes.

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fuzzy-logic-toolkit • Science 44%

A mostly MATLAB-compatible fuzzy logic toolkit for Octave.

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tutorial-developing-benchmarks • Science 44%

Tutorial on developing benchmarks

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dwhiteplume.github.io • Science 44%

Basic info about me.

Updated 6 months ago

ramanspy • Science 67%

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lambdanative-and-fdroid • Science 44%

Introduction to building and distributing Android applications

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ultralystics-baseline • Science 44%

Based on the official Ultralytics repository, I've added some of my own tricks to serve as a baseline for various comparative experiments in object detection.

Updated 6 months ago

intro-tableau • Science 54%

An introductory lesson on data visualization using Tableau Public. Learners create charts, explore datasets, and build dashboards—no prior experience required.

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mmdetection-baseline • Science 44%

mmdetection-baseline for myself

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dataportal • Science 44%

Serverless data portal

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mzs-tools • Science 67%

QGIS plugin for Italian Seismic Microzonation

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microneuseg • Science 49%

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mumu • Science 44%

C++ implementation of lulu, a R package for post-clustering curation of metabarcoding data

Updated 6 months ago

evexplorer • Science 57%

nf-core/evexplorer is a pipeline for analyzing RNA data from extracellular vesicles, compatible with technologies such as nextflex, comboSeq, and ONT with further support forthcoming. evexplorer handles QC, expressed region detection, library size normalization and Differential RNA Expression (DRE)

Updated 6 months ago

edu.sc.seis • Science 67%

Flexible Seismic Travel-Time and Raypath Utilities

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interface_serial_link • Science 44%

Definitions for custom messages, services, and actions in ROS2.

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macchiato • Science 57%

Macchiato is a Petri Nets implementation for Python 3 with a focus of usability and scriptability.

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sslip • Science 57%

Slip System based Identification of Local Plasticity

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yaml • Science 54%

Qompass AI on YAML

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caldp • Science 52%

The DMS environment for HST calibration software

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fair_genome_indexer • Science 44%

Download and index Ensembl sequences and annotations, remove non-canonical chromosimes, remove low TSL, index with multiple tools

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forgeffects • Science 44%

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irma-core • Science 57%

A tool to aid virus sequencing and accelerate IRMA.

Updated 5 months ago

VSMOD: A Vessel Segmentation and MODelization plugin for 3D Slicer • Science 93%

VSMOD: A Vessel Segmentation and MODelization plugin for 3D Slicer - Published in JOSS (2025)

Updated 6 months ago

mlflow-cnn • Science 54%

Galaxy Redshift Estimation Using Convolutional Neural Networks with MLflow Tracking

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awesome-arm-in-smart-agriculture • Science 67%

A collection of literature on the use of association rule mining methods in smart agriculture

Updated 6 months ago

ai-attendance-system • Science 44%

An AI-powered attendance system using YOLOv5 for face detection and recognition.

Updated 6 months ago

sixarm_ruby_sentry • Science 44%

SixArm.com » Ruby » Sentry simple monitorning of URI links, DNS names, etc.

Updated 6 months ago

maxwel_cookie • Science 44%

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stars-reproduce-johnson-2021 • Science 77%

Assessing the computational reproducibility of Johnson et al. 2021 as part of STARS.

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daedalus • Science 52%

[UNDER DEVELOPMENT] R package implementing the DAEDALUS model for projecting and optimising health, social, and economic costs of a pandemic.

Updated 6 months ago

wneq • Science 67%

wneq is a Python package for computing nuclear equilibria in nucleosynthesis.

Updated 6 months ago

terraform-provider-iactools • Science 44%

LederWorks IaC Tools terraform provider

Updated 6 months ago

sparsematrixcolorings.jl • Science 67%

Coloring algorithms for sparse Jacobian and Hessian matrices

Updated 6 months ago

ml-template • Science 44%

Collections of code snippets for and beyond machine learning

Updated 6 months ago

best-practice-documentation • Science 44%

The best-practice documentation of SDSC (mirror from Gitlab)

Updated 6 months ago

CloudCovErr • Science 46%

Pipeline for debiasing and improving error bar estimates for photometry on top of structured/filamentary background.

Updated 6 months ago

uagents • Science 44%

A fast and lightweight framework for creating decentralized agents with ease.

Updated 6 months ago

stats-strided-dsvariance • Science 44%

Calculate the variance of a single-precision floating-point strided array using extended accumulation and returning an extended precision result.

Updated 6 months ago

jsuart • Science 44%

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ncvx_documentation • Science 52%

NCVX documentation page: https://ncvx.org

Updated 6 months ago

hyteg • Science 67%

HyTeG (Hybrid Tetrahedral Grids) is a C++ framework for large scale high performance finite element simulations based on (but not limited to) geometric multigrid. This is a mirror of the official https://i10git.cs.fau.de/hyteg/hyteg. Please create Issues there!

Updated 6 months ago

ospx • Science 44%

Extension package to farn, adding support to build OSP (co-)simulation cases using functional mockup units (FMUs).

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aimassist • Science 54%

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@li0ard/streebog • Science 44%

Streebog hash function in pure TypeScript

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campari • Science 44%

A repository for Scene Modeling Photometry for SNe

Updated 6 months ago

treemap • Science 44%

Pretty treemap with memory efficient input streaming and output streaming for the SVG image

Updated 6 months ago

radtrack • Science 67%

Dataset for Range-Azimuth-Doppler Based Radar Multi-Object Tracking

Updated 6 months ago

.github • Science 44%

Updated 6 months ago

thread-chunks • Science 44%

A python package for performing memory intensive computations in parallel using chunks and checkpointing.

Updated 6 months ago

tb-lod-ttp • Science 57%

This repository will hold all of the code necessary to recreate the analyses presented in "Analysis of time-to-positivity data in tuberculosis treatment studies: Identifying a new limit of quantification" by Dufault et al published in the International Journal of Antimicrobial Agents (2025).

Updated 6 months ago

autocv • Science 44%

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nifreeze • Science 67%

A flexible framework for volume-wise artifact estimation and correction across multiple 4D neuroimaging modalities (diffusion MRI, functional MRI, and PET)

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aida-data • Science 44%

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edirom-online • Science 67%

Edirom Online is a tool for presenting historical-critical music editions in digital form.

Updated 6 months ago

crisprzip-tool • Science 57%

A GUI for making CRISPR activity predictions with the CRISPRzip model

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chat-ai • Science 57%

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cohesion-tools • Science 57%

Preprocessing and evaluation scripts for Japanese cohesion analysis

Updated 6 months ago

scratch-coding-hut.github.io • Science 44%

Website for Coding Hut

Updated 6 months ago

@stanfordspezi/spezi-firebase • Science 44%

Spezi Firebase Abstractions to Develop Spezi-Based Firebase Projects

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ai4data-use • Science 44%

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scoda • Science 44%

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cyclone • Science 44%

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telemannletters • Science 44%

Catalogue of the correspondence of Georg Philipp Telemann

Updated 6 months ago

rfc3987-syntax • Science 44%

Helper functions to syntactically validate strings according to RFC 3987.

Updated 6 months ago

asv • Science 44%

Automatic Source Valuation (ASV) that considers usage of sources in context