GitHub
maier-saupe-lc-hydrodynamics
Work at University of Minnesota using finite element methods to simulate hydrodynamics of liquid crystals with a Maier-Saupe field theory free energy
molscore
An automated scoring function to facilitate and standardize the evaluation of goal-directed generative models for de novo molecular design
https://github.com/fhooeaist/coffee-burns-snake
Speed-Comparison of Convolution Filters in Java and Python
https://github.com/fhooeaist/biss
This software performs the segmentation of blood vessels in MRI-Volumes of mural brains.
coeusai
QGIS plugin for exploratory and iterative segmentation of geo raster data
python-codes-for-cinematic-analysis.
Some codes for cinematic analysis, will be updating as I make more.
enhanced-yolov5s
Enhanced YOLOv5s with Multidimensional Attention for Precise Small Target Detection in UAV Aerial Imagery
https://github.com/fhstp/livevis
LiveVis is real-time visualisation of data which can be embedded into a stage. Data are collected from an individual web questionnaire.
xml_variant_ingestion
ICGC ARGO variant calling pipeline which digest xml to vcf variant format
gliderad2cp
Processing toolchain for AD2CP data collected from autonomous underwater gliders. Processes from raw data to shear values ready for referencing.
astrobeecd
[IAC 2023, AA 2024] This repository contains the code used in our paper, "AstrobeeCD: Change Detection in Microgravity with Free-Flying Robots." This method is useful for detecting 3D scene changes given a 3D model, a sequence of images, and a sequence of camera poses.
dappr-rust
Dappr Escrow Platform is a decentralized web application built on the Solana blockchain that enables users to securely create, manage, and participate in milestone-based escrow agreements using their Solana wallets. It features a modern, user-friendly interface, real-time status updates, and seamless wallet integration for trustless transactions.
epichains
Methods for simulating and analysing the sizes and lengths of infectious disease transmission chains from branching process models
generatejanafpolynomials
Generate JANAF polynomials in CHEMKIN-II format for OpenFOAM
geotechnical-simulations-with-moose
This whitepaper collects information and code for geotechnical simulations with the software Moose.
smith-embedding
Mathematica code to generate the Smith embedding (a.k.a. rectangle packing) of a planar map.
magic_performances_2015_data_tables
An extraction of data tables from the MAGIC performance paper of 2015
roship_io
A collection of ROS2 Nodes and a library for comminicating with external devices over UDP, TCP, and serial.
math-base-special-roundf
Round a single-precision floating-point number to the nearest integer.
math-base-special-xlogyf
Compute `x * ln(y)` so that the result is `0` if `x = 0` for single-precision floating-point numbers `x` and `y`.
crypticphenotypeanalysisscripts
A collection scripts used in the cryptic phenotype analysis manuscript.
fstmorph
A set of scripts for generating an FST and associated yaml tests from spreadsheets.
redcap_javascript_injector
A REDCap External Module that allows injection of JavaScript on pages.
gdt
GDT is a tool for gene dictionary management, works with annotated genomes, handles .gdict and GFF3 files, and provides both programmatic and interactive interface.
amino
Aggregate data and R scripts used to interpret and plot HPLC and Raman spectroscopy data related to amino acid preservation within Martian regolith simulants
hort-lidar-processing
This repository contains the code and spreadsheet data for all lidar processing operations. Point clouds are stored separately in Purdue Box.
context-engineering
"Context engineering is the delicate art and science of filling the context window with just the right information for the next step." — Andrej Karpathy. A frontier, first-principles handbook inspired by Karpathy and 3Blue1Brown for moving beyond prompt engineering to the wider discipline of context design, orchestration, and optimization.
phylotrack-algorithm-analysis
Manuscript, split from hstrat-algorithm-analysis
life-hunting
Full code used to produce my MRes project results on "Quantifying Species-Specific Responses to Hunting Pressure."
about
Documentation, guides, templates, and how to's for scientists and data managers working on the International Year of the Salmon 2022 Expedition
https://github.com/dcan-labs/daic2hcp
tool for projecting preprocessed volumetric MR data from the DAIC onto HCP grayordinates
mt-smac
A novel approach designed for optimizing highly parametrized algorithms.
livestocksim
Provides a series of functions to process walk-over weight data and simulate daily weights of cattle.
za-isizulu-siswati-news-2022
IsiZulu News (articles and headlines) and Siswati News (headlines) Corpora - za-isizulu-siswati-news-2022
redcap_nedcaptcha
A REDCap External Module that provides CAPTCHAs without any external service dependencies.
fanuc
Code & data for “Fatigue-Aware Sub-Second Combinatorial Auctions for Dynamic Cycle Allocation in Human–Robot Collaborative Assembly”.
darts-nextgen
Panarctic Database of Active Layer Detachment Slides and Retrogressive Thaw Slumps from Deep Learning on High Resolution Satellite Imagery.
2025-05-20-utk-online
DC workshop website organized by University of Tennessee Knoxville on May 20 - 21, 2025
go-n3rdet
[CVPR 2025] GO-N3RDet: Geometry Optimized NeRF-enhanced 3D Object Detector
pypomp
Inference and modeling for partially observed Markov process (POMP) models
