GitHub

https://github.com

Updated 11 months ago

aqorg • Science 52%

A Python 3 package to estimate the thermodynamic properties and HKF parameters of aqueous organic molecules using second order group additivity methods.

Updated 11 months ago

hchs-sol_sdb_metabolomics • Science 44%

Code and output for HCHS/SOL SDB MRS project

Updated 11 months ago

RationalVectorFitting • Science 67%

Fast Relaxed Vector-Fitting algorithm in Julia

Updated 11 months ago

lasertram-db • Science 67%

A complete dashboard for reducing laser ablation icp-ms data

Updated 11 months ago

butterfly-mimicry • Science 65%

Exploring the influence of acuity on classification accuracy and mimicry in Heliconius butterflies.

Updated 11 months ago

structuralcircle • Science 49%

Sustainable design from used structural elements. A project about building design from used elements in Grasshopper and Rhino.

Updated 11 months ago

vrosenberg1878 • Science 67%

Digitised comparative word list derived from von Rosenberg's "Der Malayische Archipel: Land und Leute in Schilderungen, gesammelt während eines driessig-jährigen Aufenhaltes in den Kolonien" from 1878.

Updated 11 months ago

autogen-learning • Science 54%

用于学习autogen源码

Updated 11 months ago

math-base-special-minf • Science 44%

Return the minimum single-precision floating-point number.

Updated 11 months ago

complex-float64-base-assert • Science 44%

Base (i.e., lower-level) double-precision complex number assertion functions.

Updated 11 months ago

asli-pipeline • Science 75%

This repository contains a pipeline for operational execution of the Amundsen Sea Ice Low calculations, provided in the asli package. The functions in the asli package are described in detail in the package repository amundsen-sea-low-index.

Updated 11 months ago

ndarray-base-from-scalar-like • Science 44%

Convert a scalar value to a zero-dimensional ndarray having the same data type as a provided ndarray.

Updated 11 months ago

@stdlib/math-base-ops-add4 • Science 44%

Compute the sum of four double-precision floating-point numbers.

Updated 11 months ago

math-base-special-nanmaxf • Science 44%

Return the maximum value of two single-precision floating-point numbers, ignoring NaN.

Updated 11 months ago

markdownreports • Science 49%

Type Less, Plot More. Create and auto-annotated and -saved (base) plots with very little code, and write (markdown) reports easily from your R scripts.

Updated 11 months ago

descriptron • Science 49%

A python GUI for custom training and prediction of AI models for automated taxonomic species descriptions

Updated 11 months ago

bigwham-tutorials • Science 57%

Tutorials for BigWham

Updated 11 months ago

gettaxoncs • Science 44%

Get taxonomic and conservation status of Indonesian wildlife

Updated 11 months ago

datafold • Science 67%

Extended Dynamic Mode Decomposition for system identification from time series data (with dictionary learning, control and streaming options). Diffusion Maps to extract geometric description from data.

Updated 11 months ago

mymodule.jl • Science 44%

Updated 9 months ago

https://github.com/llrs/histime • Science 13%

Provides an extension to ggplot2 for histogram of ranges of dates.

Updated 11 months ago

cnn-soiltextureclassification • Science 77%

1-dimensional convolutional neural networks (CNN) for the classification of soil texture based on hyperspectral data

Updated 11 months ago

declare-repo • Science 49%

Social Repository for Storing and Sharing Declare Process Models for Primarily Model Reuse and Benchmarking Purposes

Updated 11 months ago

highway-env • Science 67%

Updated 11 months ago

delab-trees • Science 54%

Updated 11 months ago

elicipy-test • Science 54%

Repo to test the elicipy implementation

Updated 11 months ago

distance-explainer • Science 67%

XAI method to explain distances in embedded spaces

Updated 11 months ago

trl • Science 44%

Updated 11 months ago

cb-sheets • Science 44%

Basic edition of cb-sheets

Updated 11 months ago

punchbowl • Science 75%

Science processing code for the PUNCH mission

Updated 11 months ago

minami2024 • Science 49%

Updated 11 months ago

iaoptativa • Science 57%

Updated 11 months ago

knnpe • Science 49%

knnpe: A Python package implementing the k-nearest neighbor permutation entropy

Updated 11 months ago

hotlink • Science 44%

Hotspot Learning and Identification NetworK

Updated 11 months ago

stac-model • Science 67%

STAC Machine Learning Model (MLM) Extension to describe ML models, their training details, and inference runtime requirements.

Updated 11 months ago

h2rbox-mmrotate • Science 54%

[ICLR'23] PyTorch Implementation for H2RBox

Updated 11 months ago

znllmfactory • Science 44%

Updated 11 months ago

inbomd • Science 67%

An R package with a collection of RMarkdown styles and templates. Elaborate examples are available at https://github.com/inbo/INBOmd_examples

Updated 11 months ago

moxunit • Science 44%

An xUnit framework for Matlab and GNU Octave

Updated 11 months ago

lnhpp • Science 54%

An OpenFOAM's post-processing for local normalized helicity.

Updated 11 months ago

research-team-co-authorship • Science 54%

Searches in PubMed and retrieves co-authored articles via the Entrez Programming Utilities

Updated 11 months ago

reproresearch • Science 54%

ReproResearch: A ready-to-use repository for FAIR reproducible research (data) projects

Updated 11 months ago

fairhub-developer • Science 67%

Development documentation for the fairhub.io project

Updated 11 months ago

predicting_alarm_audibility • Science 49%

This Python code is derived from the research article "Evaluating and Predicting the Audibility of Acoustic Alarms in the Workplace Using Experimental Methods and Deep Learning" published in the journal Applied Acoustics. It provides a framework for predicting the audibility of acoustic alarms in noise, and includes scripts to reproduce the results

Updated 4 months ago

Chemical Recommender System: Replacement Suggestions for Small Molecules • Science 87%

Chemical Recommender System: Replacement Suggestions for Small Molecules - Published in JOSS (2026)

Scientific Software
Updated 11 months ago

portalcasting — Peer-reviewed • Science 59%

portalcasting: Supporting automated forecasting of rodent populations - Published in JOSS (2022)

Scientific Software
Updated 11 months ago

gtexr — Peer-reviewed • Science 98%

gtexr: A convenient R interface to the Genotype-Tissue Expression (GTEx) Portal API - Published in JOSS (2025)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

gtk-fortran — Peer-reviewed • Science 54%

gtk-fortran: a GTK+ binding to build Graphical User Interfaces in Fortran - Published in JOSS (2019)

Scientific Software
Updated 11 months ago

chirps — Peer-reviewed • Science 93%

chirps: API Client for the CHIRPS Precipitation Data in R - Published in JOSS (2020)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

iheatmapr — Peer-reviewed • Science 95%

iheatmapr: Interactive complex heatmaps in R - Published in JOSS (2017)

Scientific Software
Updated 11 months ago

gibbonNetR — Peer-reviewed • Science 93%

gibbonNetR: an R Package for the Use of Convolutional Neural Networks for Automated Detection of Acoustic Data - Published in JOSS (2025)

Engineering (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

grepq — Peer-reviewed • Science 98%

grepq: A Rust application that quickly filters FASTQ files by matching sequences to a set of regular expressions - Published in JOSS (2025)

Scientific Software
Updated 11 months ago

rnassqs — Peer-reviewed • Science 95%

rnassqs: An R package to access agricultural data via the USDA National Agricultural Statistics Service (USDA-NASS) 'Quick Stats' API - Published in JOSS (2019)

Biochemistry, Genetics and Molecular Biology (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

rtweet — Peer-reviewed • Science 46%

rtweet: Collecting and analyzing Twitter data - Published in JOSS (2019)

Sociology
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

containerit — Peer-reviewed • Science 95%

containerit: Generating Dockerfiles for reproducible research with R - Published in JOSS (2019)

Scientific Software · Peer-reviewed
Updated 11 months ago

dispersiveshallowwater.jl • Science 67%

A Julia library of structure-preserving numerical methods for dispersive wave equations

Updated 8 months ago

molify: Molecular Structure Interface • Science 87%

molify: Molecular Structure Interface - Published in JOSS (2025)

Scientific Software
Updated 11 months ago

mitolina — Peer-reviewed • Science 93%

mitolina: MITOchondrial LINeage Analysis - Published in JOSS (2019)

Sociology
Scientific Software · Peer-reviewed
Updated 8 months ago

WorMe: A user-oriented software for <em>Caenorhabditis elegans</em> length determination • Science 87%

WorMe: A user-oriented software for <em>Caenorhabditis elegans</em> length determination - Published in JOSS (2025)

Updated 11 months ago

MatrixBandwidth • Science 44%

Fast algorithms for matrix bandwidth minimization and matrix bandwidth recognition in Julia.

Scientific Software
Updated 11 months ago

nasapower — Peer-reviewed • Science 95%

nasapower: A NASA POWER Global Meteorology, Surface Solar Energy and Climatology Data Client for R - Published in JOSS (2018)

Updated 11 months ago

emgflow • Science 44%

Github repository for the EMGFlow Python package.

Updated 8 months ago

MujocoROS2Control: Seamless MuJoCo Integration with ROS 2 for Robot Simulation and Control • Science 87%

MujocoROS2Control: Seamless MuJoCo Integration with ROS 2 for Robot Simulation and Control - Published in JOSS (2025)

Updated 11 months ago

SpectralUnmixing • Science 44%

Spectral unmixing, oriented towards imaging spectroscopy data. Lots of flavors included.

Scientific Software
Updated 11 months ago

dataaimsr — Peer-reviewed • Science 93%

dataaimsr: An R Client for the Australian Institute of Marine Science Data Platform API which provides easy access to AIMS Data Platform - Published in JOSS (2021)

Scientific Software · Peer-reviewed
Updated 11 months ago

mcmanamay-etal_2024_erl • Science 75%

Divergent Urban Land Trajectories Under Alternative Population Projections within the Shared Socioeconomic Pathways

Updated 11 months ago

assembly_finder • Science 67%

snakemake-powered cli to download genomes using NCBI datasets

Updated 11 months ago

spacy-models • Science 67%

German spaCy models trained on German UD-HDT and on a collection of gold and silver standard NER corpora

Updated 11 months ago

HainkeEtAl_SLEEP_2025 • Science 57%

Code and materials for Hainke et al. (2025), SLEEP.

Updated 11 months ago

gmwmx2 • Science 49%

The gmwmx2 R package implements the Generalized Method of Wavelet Moments with Exogenous Inputs estimator (GMWMX) presented in Voirol, L., Xu, H., Zhang, Y., Insolia, L., Molinari, R. and Guerrier, S. (2024)

Updated 11 months ago

tamarin • Science 67%

Tamarin is an open-source interactive alternative ranking system for Multi-Criteria Decision-Making (MCDM) designed to help users select the optimal technology alternatives based on their preferences and criteria.

Updated 11 months ago

psychiana-demo • Science 44%

Updated 11 months ago

partiallyseparablesolvers.jl • Science 54%

Trust-region methods with partitioned quasi-Newton approximations

Updated 11 months ago

rent-and-security-in-melb-suburbs • Science 44%

Artificial Intelligence and Machine Learning (40%)
Updated 11 months ago

fw-rde • Science 67%

Official implementation of the paper "Interpretable Neural Networks with Frank-Wolfe: Sparse Relevance Maps and Relevance Orderings" by J. Macdonald, M. Besançon, and S. Pokutta (2021).

Updated 11 months ago

dhqzoj-dev • Science 44%

Updated 11 months ago

prova • Science 44%

Updated 11 months ago

collinear • Science 49%

R package to manage multicollinearity in modeling data frames.

Updated 11 months ago

variantscope • Science 57%

somatic structural variant scoping

Updated 11 months ago

tkp • Science 44%

A transients-discovery pipeline for astronomical image-based surveys

Mathematics
Updated 11 months ago

hydrogauge • Science 44%

Updated 11 months ago

musei-oliveriani-podcast • Science 44%

Podcast riguardo le opere contenute nei Musei Oliveriani di Pesaro.