GitHub
exponential-asymptotics
General code to run the computation to study homoclinic snaking in general reaction-diffusion equations.
pylipdtutorials
This repository contains notebooks to learn how to use pylipd.
software_lifecycle_planning
FAIR2 for research software Training program at the U. of Sheffield
methane_dispersion_modelling
Functions and scripts to do dispersion modelling of dissolved methane released to the water column at methane seeps.
ux-design-strudel
A lesson teaching rapid usability testing, intended for use as a 2-3 hour hands-on tutorial
mbon_data_workshop_2025
This workshop aims to provide MBON teams with practical tools and expert guidance for mobilizing their biological data into OBIS.
aopwikirdf
This repository contains code for the AOP-Wiki XML-to-RDF conversion and guidance to deploy a Virtuoso SPARQL endpoint Docker image that is loaded with the AOP-Wiki RDF
psf-toolbox
A custom MATLAB toolbox for fMRI data acquisition and estimation of population spatial frequency tuning.
sfrc
sFRC: To detect hallucinated regions in medical images reconstructed using AI
stat-phys-notes
Lecture Notes for the MSc course "Statistical Methods for the Physical Sciences"
charting-first-encounters
Project website for Christian Egan at Boston College
medal
Large medical text dataset curated for abbreviation disambiguation, designed for natural language understanding pre-training in the medical domain
awesome-llms-meet-multimodal-generation
🔥🔥🔥 A curated list of papers on LLMs-based multimodal generation (image, video, 3D and audio).
ahmad_jamal_mini_exhibit
This mini exhibit showcases some items from this collection for LIS2222.
hbb2obb
📦 HBB2OBB is a Python library for converting horizontal (axis-aligned) bounding boxes to oriented (rotated) bounding boxes using SAM-based segmentation. Includes tools for visualization, evaluation, format conversion, and hyperparameter tuning.
csc783-project
Term Project for CSC 783 (Data Visualization, Spring 2025) at Eastern Kentucky University
carbon
The ultimate high-level library for C/C++ (с реализацией на этих языках). 🎩
res_aligner_net
[Medical Image Analysis] Residual Aligner-based Network (RAN): Motion-Aware Structure for Coarse-to-fine Discontinuous Deformable Registration
cme4501
Book on optimization using python for CME4501 Engineering Systems Optimization
vdist-solver-fortran
Velocity distribution solver for python written in Fortran
categorical_planning
Categorical Planning for Multi-Modal Tasks in Large Language Models
LaplacianOpt
A Julia/JuMP Package for Maximizing Algebraic Connectivity of Undirected Weighted Graphs
topologyml-electrode-polarization
Code accompanying the paper "Topology-Informed Machine Learning for Efficient Prediction of Solid Oxide Fuel Cell Electrode Polarization" by M. Szemer, Sz. Buchaniec, M. Prokop, and G. Brus
picklesv2
Code used for updated version of PICKLES (https://doi.org/10.1093/nar/gkx993). Application found at: https://hartlab.shinyapps.io/pickles/
aeon_api
Project Aeon low-level library for interfacing with acquired data. Contains modules for raw data file io, data querying, and data processing.
hfdisorderhubbard.jl
Hatree-Fock level mean field calculation of 3D Anderson-Hubbard model
flyerenv
A gymnaisum environment for autonomous decision making in fixed-wing aircraft
qub-hri
Preprocessing Repository of QUB-Perception of Human Enagagement in Assembly Operations Dataset
https://github.com/fhooeaist/aistcv
OpenCV Wrapper for Java with Contribution Packages
psy-ugrid
A psyplot plugin for decoding unstructured grids following the UGRID conventions
deepview
Python Toolkit for introspecting machine learning models and datasets. It provides a comprehensive set of tools for analyzing and understanding both the behavior of ML models and the characteristics of datasets.
derip2
Reconstruct ancestral state sequences of fungal repeat families by correcting for RIP-like mutations. Mask RIP or deamination events from alignments.
https://github.com/fhooeaist/bpmn-viz
BPMN visualization provides a functionality to generate the diagramm interchange information for a given BPMN model.
cmip6-data-citation-service
Software of the Data Citation Service infrasructure component for the Coupled Model Intercomparison Project Phase 6 (CMIP6)
primme
The repository for the Physics-Regulated Interpretable Machine Learning Microstructure Evolution (PRIMME) framework for learning and emulating microstructure grain growth.
https://github.com/fhooeaist/ocel-model
Autogenerated Java Model for the OCEL-Standard
epyt-control
A Python package for implementing and evaluating control algorithms & strategies in smart water networks.
gvec
GVEC - A flexible 3D MHD equilibrium solver GVEC (Galerkin Variational Equilibrium Code) is an open-source software for the generation of three-dimensional ideal MHD equilibria. _________________NOTE_________________ THIS REPO IS ONLY A MIRROR, main is the latest release, GVEC is developed here:
maier-saupe-lc-hydrodynamics
Work at University of Minnesota using finite element methods to simulate hydrodynamics of liquid crystals with a Maier-Saupe field theory free energy
molscore
An automated scoring function to facilitate and standardize the evaluation of goal-directed generative models for de novo molecular design
https://github.com/fhooeaist/coffee-burns-snake
Speed-Comparison of Convolution Filters in Java and Python
https://github.com/fhooeaist/biss
This software performs the segmentation of blood vessels in MRI-Volumes of mural brains.
