GitHub
unhide-docs
Mirror of https://codebase.helmholtz.cloud/hmc/hmc-public/unhide/documentation
microrna-lung-cancer-associations
An association study to identify a robust miRNA biomarker signature at various stages of lung cancer.
https://github.com/access-nri/access-om2
ACCESS-OM2: ACCESS Ocean-Sea Ice Model
first-steps-with-r-training
repository of the 2-day course "First steps with R in Life Sciences" from SIB-training
rrwnet
Official repository of the paper "RRWNet: Recursive Refinement Network for Effective Retinal Artery/Vein Segmentation and Classification", published in Expert Systems with Applications (Dec 2024).
coolmpm
An implementation of the MPM for a final project for a course in computational finite inelasticity and multiphase mechanics.
https://github.com/access-nri/access-om2-bgc
ACCESS-OM2-BGC: ACCESS Ocean-Sea Ice Model with WOMBAT Biogeochemistry
repeatmaskerfaster
Repeat Masker optimized for running in batches on a cluster
drag-coefficient-prediction
Physics-Guided Neural Network for predicting drag coefficients of spheres in fluid flow
pride-resources
PRIDE Resources Forum (https://github.com/PRIDE-Archive/pride-resources/discussions)
mkdocs-utilizing-pyscript
Example of a mkdocs page using your own code interactively utilizing pyscript
test_datamanag
this is a test repo for the course Introduction to Research Data Management
scikit-talk
Scikit-talk is an open-source toolkit for processing collections of real-world conversational speech in Python. The toolkit aims to facilitate the exploration of large collections of transcriptions and annotations of conversational interaction.
@stdlib/random-strided-rayleigh
Fill a strided array with pseudorandom numbers drawn from a Rayleigh distribution.
https://github.com/acclab/dabest-python
Data Analysis with Bootstrapped ESTimation
array-base-cunone-by-right
Cumulatively test whether no array element in a provided array passes a test implemented by a predicate function, while iterating from right-to-left.
amocarray
Basic repository for reading AMOC transport (volume transport only) from arrays.
inferring-exon-and-intron-metadata-from-.gff-file
This pipeline infers exon functional annotations using coordinates from a .gff file and derives corresponding intron coordinates along with relevant annotations. Users can optionally specify the length of intronic fragments to extract. The pipeline is suited for splicing code analyses.
frontiersdata
Data and Statistical Analysis for "An Analysis of Dialogue Repair in Virtual Assistants"
template
Use this template to quickly start with your own interactive textbook that includes our "standard" selection of features and workflow to host your book on ....github.io/...
nanotax
a pipeline for the characterization of microbial communities with Nanopore
abondance
Mise à jour et standardisation des séries chronologiques d'abondance du saumon atlantique sur les cours d'eau de l'ORE DiaPFC
machine-learning-novice-sklearn
A Carpentry style lesson on machine learning with Python and scikit-learn.
modernstats_git
The UNECE ModernStats proposal for using Git in Official Statistics. This website is in pre-alpha
cell-seek
One single-cell pipeline to rule them all, one pipeline to find them, one pipeline to unify them all, and with the data bind them.
adversarialtriggers
TACL 2025: Investigating Adversarial Trigger Transfer in Large Language Models
headsup
Utility server and web application to observe Unity-based VR tasks operating on headsets via LAN.
@stdlib/slice-base-reduced-dimensions
Return a list of reduced dimensions in an un-normalized multi-slice.
ptlix
Portable Test Library Interface for different RTOSs and Software Test Libraries
spreading-depolarization
Analysis scripts related to manuscript "Hippocampal stroke in freely behaving mice reveals sex differences in presentation and behavioural impact of contralesional spreading depolarization"
lobster
Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation
equivalence-fiddle
Tool for finding the best ways of equating / preordering / distinguishing finite process models.
konnektor
Algorithms for various Network Layouts and Tooling for planning FE Calculations
landlensdb
Streamlined geospatial image handling and database management with Python and PostGIS
template
Template/Demo for Oral History as Data (OHD) Framework. Copy it by clicking Use This Template above!
coherent-states-rpa
Code examples for supramolecular polymers using the random phase approximation (RPA)
