GitHub

https://github.com

Updated 10 months ago

harvester-curator • Science 44%

Collect metadata from a data and/or software directory and create the corresponding dataset in the data repository, DaRUS

Updated 10 months ago

codefair-test-repo • Science 44%

A repo for testing codefair

Updated 10 months ago

leslie • Science 49%

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pgrdup • Science 67%

Discover Probable Duplicates in Plant Genetic Resources Collections

Updated 10 months ago

biocor • Science 44%

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qualitymetadataspatiallandmarkdataset • Science 49%

Metadata describing and assessing the quality of spatial landmark datasets in mountain area

Updated 10 months ago

babette • Science 49%

babette is an R package to work with BEAST2

Updated 10 months ago

treeio • Science 49%

:seedling: Base Classes and Functions for Phylogenetic Tree Input and Output

Updated 10 months ago

viper • Science 67%

Viral Inhibition via Peptide Engineering and Receptor-Mimicry

Updated 10 months ago

e3sm_rrm • Science 57%

Updated 10 months ago

tccon-caltechdata • Science 52%

Scripts for uploading TCCON data to CaltechDATA

Updated 10 months ago

artemis • Science 44%

Artemis is my project to create portable Oberon-07 modules that can be used in POSIX and Oberon System.

Updated 10 months ago

cover • Science 44%

Clustering with Overlaps in R

Updated 10 months ago

panako_adjusted • Science 57%

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censo2017 • Science 49%

Una Base de Datos de Alto Rendimiento del Censo 2017 de Chile.

Updated 10 months ago

fairmq • Science 49%

C++ Message Queuing Library and Framework

Updated 10 months ago

beaverdam • Science 65%

Build, Explore, and Visualize Experimental Data and Metadata

Updated 10 months ago

treedistdata • Science 49%

Data and vignettes to accompany TreeDist packages

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denjji • Science 44%

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pymesa • Science 54%

Allows python to interface with MESA

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stngo • Science 44%

Golang implementation of Simple Timesheet Notation.

Updated 10 months ago

myradex • Science 49%

Similar to radex, with a different way to solve the statistical equilibrium problem

Updated 10 months ago

cookiecutter-web-backend • Science 44%

Backend for cookiecutter-web

Updated 10 months ago

primarycensored • Science 67%

Primary event censored distributions.

Updated 10 months ago

resample_zarr • Science 49%

Package for resampling large zarr datasets to lower resolution.

Updated 10 months ago

shexml • Science 67%

A heterogeneous data mapping language based on Shape Expressions

Updated 10 months ago

irdm-queue-portal • Science 65%

A basic view of content currently in an InvenioRDM community queue

Updated 10 months ago

trellis • Science 44%

Trellis visualization using Python, matplotlib, pandas, and scipy

Updated 10 months ago

dendronetwork • Science 67%

Package to create dendrochronological networks

Updated 10 months ago

onefinestardust • Science 44%

Config files for my GitHub profile.

Updated 10 months ago

photosearcher • Science 49%

Searches Flickr for photographs and metadata

Updated 9 months ago

codemeticulous • Science 44%

practical validation and conversion between software metadata standards with pydantic

Updated 10 months ago

dhcurve • Science 44%

An R package for automated modelling of diameter-height relations for trees

Updated 10 months ago

rpcss • Science 67%

Constitution of Core Collections by Principal Component Scoring Strategy

Updated 10 months ago

fairdataihub-bot • Science 67%

A GitHub App that automates some of the tasks in the FAIR Data Innovations Hub GitHub organization

Updated 10 months ago

models • Science 52%

This is a Go package used to describe data models aligned with the HTML5 data types.

Updated 10 months ago

gammashiny • Science 49%

Shiny Applications for the R Package gamma

Updated 10 months ago

dmaog • Science 67%

Data Mapping Access Objects Generator

Updated 10 months ago

spacetime-sym • Science 57%

Spacetime symmetry

Updated 10 months ago

biocor • Science 44%

This is a read-only mirror of the git repos at https://bioconductor.org

Updated 10 months ago

treeio • Science 49%

This is a read-only mirror of the git repos at https://bioconductor.org

Updated 10 months ago

benchscofi • Science 67%

Package which contains implementations of published collaborative filtering-based algorithms for drug repurposing.

Updated 10 months ago

patientflow • Science 67%

Code and explanatory notebooks for predicting short-term hospital bed demand using real-time data

Updated 6 months ago

C4DYNAMICS: The Python framework for state-space modeling and algorithm development • Science 87%

C4DYNAMICS: The Python framework for state-space modeling and algorithm development - Published in JOSS (2025)

Updated 10 months ago

peridem • Science 49%

High-fidelity modeling of granular media consisting of deformable complex-shaped particles

Updated 6 months ago

YetAnotherSimulationSuite.jl: An Atomic Simulation Suite in Julia • Science 87%

YetAnotherSimulationSuite.jl: An Atomic Simulation Suite in Julia - Published in JOSS (2025)

Scientific Software
Updated 10 months ago

The MOOSE Thermal Hydraulics Module — Peer-reviewed • Science 98%

The MOOSE Thermal Hydraulics Module - Published in JOSS (2024)

Updated 10 months ago

motila • Science 67%

Pipeline for analyzing microglial fine process motility from 4D/5D multi-photon imaging data

Updated 10 months ago

jaxhps • Science 54%

jaxhps: an elliptic PDE solver built with machine learning in mind

Updated 6 months ago

TranCIT: Transient Causal Interaction Toolbox • Science 95%

TranCIT: Transient Causal Interaction Toolbox - Published in JOSS (2025)

Updated 6 months ago

GALFITools: A Python library to enhance GALFIT usage in galaxy image modeling • Science 87%

GALFITools: A Python library to enhance GALFIT usage in galaxy image modeling - Published in JOSS (2025)

Updated 5 months ago

torch_blue: A Flexible Python Package for Bayesian Neural Networks in PyTorch • Science 87%

torch_blue: A Flexible Python Package for Bayesian Neural Networks in PyTorch - Published in JOSS (2026)

Updated 10 months ago

dreamlab-2024 • Science 44%

Updated 10 months ago

server-usage-slurm • Science 44%

This code is testing good practices in software development such as making use of github workflows and testing. Also the code functions as a way to check the server usage

Updated 10 months ago

objectd • Science 54%

Updated 9 months ago

https://github.com/amitojbrar/real-time-yoga • Science 49%

Code repo for Real-time Yoga recognition using deep learning, NCAA, Springer, 2019

Updated 10 months ago

reac4cat • Science 44%

Ontology developed by Alexander Behr and Hendrik Borgelt for NFDI4Cat to describe and reason chemical reactions with focus on catalysis

Updated 10 months ago

gpt_neox • Science 54%

Updated 10 months ago

inaccuraciesmeteorologycongestionmanagement • Science 67%

Backtesting framework to asses impact of inaccurate weatherforecasts on operational congestion management

Updated 10 months ago

terror • Science 44%

Updated 10 months ago

vtk2geogram • Science 44%

.vtk to .geogram mesh file conversion

Updated 10 months ago

lenia-in-hal • Science 67%

Repository for Lenia framework, implemented in Hybrid Automata Library (HAL)

Updated 10 months ago

time_series_generator • Science 67%

Create synthetic time series data

Updated 10 months ago

vis • Science 44%

Visualisation capabilities for research data in TYPO3

Updated 10 months ago

reveal • Science 57%

ReVeaL, Rare Variant Learning, is a stochastic regularization-based learning algorithm.

Updated 10 months ago

dsh • Science 44%

Quality assurance routines for research data in TYPO3

Updated 10 months ago

or-gerrymander-alabama • Science 44%

Practice open research by studying gerrymandering in Alabama

Updated 10 months ago

lida • Science 67%

Updated 10 months ago

musical_non-markovianity • Science 44%

Code in C to compute matrices for musical analysis. Context: evaluation of musical non-Markovianity. Concept: Maria Mannone and Giuseppe Compagno. Coding: Maria Mannone

Updated 10 months ago

labweb • Science 44%

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biosnn • Science 44%

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jubench-picongpu • Science 62%

JUPITER Benchmark Suite: PIConGPU Benchmark

Updated 10 months ago

mpm-particle-generator • Science 57%

A particle generator code for the Material Point Method

Updated 10 months ago

jubench-qe • Science 62%

JUPITER Benchmark Suite: Quantum ESPRESSO Benchmark

Updated 10 months ago

ridgell-dreamlab-2024 • Science 44%

This is my class demo repository for advocating for community: dreamlab 2024!

Updated 10 months ago

dpecho • Science 67%

GR-MHD in SYCL for the 2020s and beyond

Updated 10 months ago

somef-vider • Science 44%

Web application for displaying the contents automatically retrieved from a code repository by applying the Software Metadata Extraction Framework (SOMEF)

Updated 10 months ago

clip-ood • Science 54%

Official code for the paper "Does CLIP's Generalization Performance Mainly Stem from High Train-Test Similarity?" (ICLR 2024)

Updated 10 months ago

theomining • Science 44%

Updated 10 months ago

dash-leaflet-basemaps • Science 44%

a new layer type to facilitate the setup of basemaps in dash-leaflet

Updated 10 months ago

modelacion-bayesiana • Science 54%

Notas y contenido del curso en Modelación Bayesiana para la MCD @ ITAM

Updated 10 months ago

lightguide • Science 67%

Tools for distributed acoustic sensing data.

Updated 10 months ago

ltl2dfa • Science 44%

A series of programs that can create LTL formulas or take user provided ones, converts them to a DFA and can generate Traces

Updated 10 months ago

alarm_clock • Science 44%

FreeCAD modeling of an alarm clock.

Updated 10 months ago

yaml2script • Science 57%

This is a mirror of https://gitlab.com/yaml2script/yaml2script . yaml2script is a Python script that extracts shell scripts from a GitLab CI/CD configuration file .gitlab-ci.yml and allows you to test/analyze them with tools like shellcheck.

Updated 10 months ago

double-jeopardy-in-llms • Science 54%

Code for "Double Jeopardy and Climate Impact in the Use of Large Language Models." Includes scripts for analyzing socio-economic disparities, tokenization inefficiencies, and LLM utility using FLORES-200, Ethnologue, WDI, and GPT-4 APIs.

Updated 9 months ago

https://github.com/alan-turing-institute/trustworthy-assurance • Science 75%

A site for resources on trustworthy assurance

Updated 10 months ago

volatility3 • Science 44%

Updated 10 months ago

xrlocalization • Science 67%

OpenXRLab Visual Localization Toolbox and Server

Updated 10 months ago

q4c-team • Science 44%