GitHub
xai-proteins
Insights into the inner workings of transformer models for protein function prediction
hipiler
Visual exploration of large genome interaction matrices with interactive small multiples.
https://github.com/fgcz/fcc
An automated rule-based processing tool for life science data.
ocean-geophysical-remote-sensing-data-analyzer-ogda
Ocean Physical Data analyzer
phip-seq-tp-vac
Pipeline for analysis of the Treponema pallidum PhiP-Seq assay data @ Greninger Lab
torchgeo
TorchGeo: datasets, samplers, transforms, and pre-trained models for geospatial data
https://github.com/fgcz/bfabricshiny
Manage life sciences data using R and b-fabric - a WSDL/REST interface and a tool box; main focus on MS data
https://github.com/fgcz/specl
prepare peptide spectrum matches for use in targeted proteomics using R and Bioconductor
hlb-cifar10
Train to 94% on CIFAR-10 in <6.3 seconds on a single A100. Or ~95.79% in ~110 seconds (or less!)
cvfpu
Parametric floating-point unit with support for standard RISC-V formats and operations as well as transprecision formats.
https://github.com/ivis-at-bilkent/cytoscape.js-avsdf
An implementation of the circular layout algorithm by He & Sykora
https://github.com/fgerick/shtns.jl
Fast spherical harmonic transforms using C library SHTns
manual
Book describing how to use interactive textbooks, our extensions and our workflow: teachbooks.github.io/manual (release branch).
shiyuasuka-twostageclip_swintransformer
This project revolves around creating a simplified transformer-based model for image detection. Our goal is to reduce computational complexity while still achieving high performance. We developed and evaluated two new models, offering a promising foundation for future improvements.
mmdet-rgbtdroneperson
Official code for "Drone-based RGBT Tiny Person Detection".
axiom_ai
A framework for resonance-based decision-making in artificial agents, combining celestial influences, memory feedback, and symbolic emergence.
markdown-read-to-headline
Markdown tool to read markdown from a file or stdin, then print the first headline content
mesa-explorer
Web-based visualization tool for the MESA simulations of stars. Built with Bootstrap 5.3 and d3 v7.8.4
sha256-sentence
SHA256 sentence: discover a SHA256 checksum that matches a sentence's description of hex digit words.
pmv-si-2024-1-pe6-t2-g3-gestao-med
pmv-si-2024-1-pe6-t2-g3-gestao-med created by GitHub Classroom
lcot-hydrogen-and-ammonia
Code for the paper "Levelised cost of transmission comparison for green hydrogen and ammonia in new-build offshore energy infrastructure: Pipelines, tankers, and HVDC"
isotoperesponses
Data characterizing stable isotopes in Earth, and their response functions for scattering with dark matter. Ancillary data for arXiv: 2312.08478
wetland-incentives-bioenergetics
Estimating contribution of Central Valley shorebird habitat incentive programs on shorebird bioenergetics
gdr_data_processing
code for processing raw data from Geolocating Dive Recorded deployed on Adelie penguins on Ross Island (2016-2018)
snakemake_rnaseq
A Snakemake pipeline to go from fastq mRNA sequencing files to raw and normalised counts (usable for downstream EDA and differential analysis)
sixarm_ruby_freebase
SixArm.com » Ruby » Freebase client with a simple way to query Freebase.com
covsar
Covariance Based InSAR Time Series Extraction from an ISCE stack of SLCs using Python
sixarm_ruby_factory_girl_test_examples
SixArm.com » Ruby » Factory Girl test examples for Rails
sixarm_ruby_metric_names
SixArm.com » Ruby » Metric names for numbers including kilo, mega, giga, terra, etc.
peka-eclip
Download and prepare ENCODE eCLIP raw fastq for processing with the nf-core/clipseq pipeline
cft-analysis
Python package for the analysis of data collected during the Cold Face Test (CFT) study.
sixarm_ruby_pathname_dirnames
SixArm.com » Ruby » Pathname#dirnames method to iterate on parent directories
sixarm_ruby_range_parse
SixArm.com » Ruby » Range.parse method to convert text to a Range object.
sixarm_ruby_to_id
SixArm.com » Ruby » Convert from an object to an id, uuid, etc.
wglc-scripts
Scripts used to create the WWLLN Global Lightning Climatology (WGLC)
ssid-powerful
ssid-powerful command that looks up an ssid in a data file of known-good entries
kvfinder-web-portal
KVFinder-web portal: a Shiny App for interacting with KVFinder-web service
minimaxApprox
Implementation of Remez Algorithm for Polynomial and Rational Function Approximation.
sixarm_ruby_array_slice
SixArm.com SixArm.com » Ruby » Array slice methods: #slice_by_size and #sllice_by_share
sixarm_ruby_active_record_singleton
SixArm.com » Ruby » ActiveRecord singleton object for Rails
sixarm_ruby_colorful
SixArm.com » Ruby » Colorful generates simple random color names and shade names
sixarm_ruby_examples
SixArm.com » Ruby » Examples of programming factorial and fizzbuzz
https://github.com/fgerick/multivariatepolynomials.jl
Multivariate polynomials interface
