GitHub
jupyter-scatter-tutorial
Jupyter Scatter Tutorial (that was first presented at SciPy '23)
attri_temp_neonat_mort
Code for the manuscript "Temperature-related neonatal deaths attributable to climate change in 29 low- and middle-income countries"
adopt
ADOPT: intrinsic protein disorder prediction through deep bidirectional transformers
geo-roughness-tool
Comprehensive tool designed for geospatial analysis, allowing users to calculate and categorizethe surface roughness of Digital Elevation Models (DEMs) using the standard deviation of height within a specified window size.
fish-simulator
Python toolbox to transform zebrafish tracking data to tail animations
velotrack
VeloTrack is a Vehicle Speed Analysis System designed to estimate vehicle speeds from CCTV footage.
JPhyloRef
JPhyloRef: a tool for testing and resolving phyloreferences - Published in JOSS (2021)
observationresolution
Haskell specifications & ontology design patterns for observation and observation collection resolution
quadris-project-pre-crash-near-crash-database
Pre-crash/near-crash database used/developed in the QUADRIS (Improved quantitative driver behavior models and safety assessment methods for ADAS and AD) project.
uDALES
uDALES: large-eddy-simulation software for urban flow, dispersion, and microclimate modelling - Published in JOSS (2021)
cycle-permutation-graphs
Contains an algorithm for generating cycle permutation graphs as well as an algorithm for filtering cycle permutation graphs. The generator also contains options for the generation of non-hamiltonian graphs and/or graphs with at least a specific girth.
na_logfiles
This is a repository that illustrates how you can use network analyses to analyze web-log files.
optical-filter-design-tool
What is the lowest insertion loss for a double-ring bandpass filter? How narrow the bandwidth can be made? These two factors are closely connected with the passband shape of the spectrum. This calculator helps you to visualize this, as well as designing a filter. If you used this tool in your work, please cite the paper in "Cite this repository".
quant-methods-elites
Quantitative Methods for Studying Elites: Demonstration for R
network-tree-reconciliation
Code and data for "An efficient algorithm for the reconciliation of a gene network and species tree"
thesis-nnlib
A machine-learning framework written in C++ and OpenACC-CUDA, inspired by Tensorflow and Keras, for training and evaluation of deep neural networks in NVIDIA GPU-accelerated systems.
r-nameparser-lib
An R library allowing parsing of surname, first name, and gender based on US census data.
g-rex_public
A Real World annotated physiological Dataset of Group Experiences
uc-ias-workflows
Data and Model workflows for the Invasive Alien Species Digital Twin (IASDT)
compromise.jl
First-Order Multi-Objective Optimizer — Derivative-Free and Gradient Based
sklearn-argo-cookbook
Accessing publicly available data from Argo ocean profilers, and using Scikit-learn functions to train machine learning models.
diffusers
Modification to run inference of Stable Diffusion models from HF. Will be included in the tutorial.
c212
c212: An R Package for the Detection of Safety Signals in Clinical Trials Using Body-Systems (System Organ Classes) - Published in JOSS (2020)
RK-Opt
RK-Opt: A package for the design of numerical ODE solvers - Published in JOSS (2020)
ExTemp
ExTemp: A computational and image-processing suite for extracting temporal barcodes - Published in JOSS (2020)
G3F
G3F: Global, Multidimensional Spectral Regression Analysis - Published in JOSS (2019)
quanteda
quanteda: An R package for the quantitative analysis of textual data - Published in JOSS (2018)
A Julia package for bilevel optimization problems
A Julia package for bilevel optimization problems - Published in JOSS (2019)
Compare Expression Profiles for Pre-defined Gene Groups with C-REx
Compare Expression Profiles for Pre-defined Gene Groups with C-REx - Published in JOSS (2019)
unsafe
A package for adding parametric uncertainty to the national structure inventory and estimating flood losses with uncertain depth-damage relationships
swsc
swsc: A sitewise UCE partitioner - Published in JOSS (2019)
NeuNorm
NeuNorm: Neutron Imaging Normalization Library - Published in JOSS (2018)
sacro-ml
Collection of tools and resources for managing the statistical disclosure control of trained machine learning models
qir-spec
QIR specification defining how to represent quantum programs within the LLVM IR
adaptive-rl-traffic-signal-control
thereminq-llama
ThereminQ - LLama QuantOPS : dedicated to interaction and training LLaMa's with QC data
eventdisplay
A reconstruction and analysis pipeline for ground-based imaging atmospheric Cherenkov Telescopes
stats-strided-nanvarianceyc
Calculate the variance of a strided array ignoring NaN values and using a one-pass algorithm proposed by Youngs and Cramer.
stats-strided-nanvariancetk
Calculate the variance of a strided array ignoring NaN values and using a one-pass textbook algorithm.
stats-strided-nanvariance
Calculate the variance of a strided array ignoring NaN values.
sumpy
Symbolic code generators for multipole and local expansions and translations
