Updated 4 months ago
dea_limma
A Snakemake workflow and MrBiomics module for performing and visualizing differential (expression) analyses (DEA) on NGS data powered by the R package limma.
Updated 4 months ago
dea_seurat
A Snakemake workflow and MrBiomics module for performing differential expression analyses (DEA) on (multimodal) sc/snRNA-seq data powered by the R package Seurat.
Updated 4 months ago
bioinformatics-templates
Reusable R/Bash scripts for RNA-Seq (DESeq2), VCF filtering, and multi-omics visualization (heatmaps, volcano plots)