Scientific Software
Updated 9 months ago

khmer release v2.1 — Peer-reviewed • Rank 18.9 • Science 100%

khmer release v2.1: software for biological sequence analysis - Published in JOSS (2017)

Updated 9 months ago

abyss • Rank 9.7 • Science 77%

:microscope: Assemble large genomes using short reads

Updated 9 months ago

https://github.com/abhishektiwari/pybloomers • Science 13%

Python implementation of various Bloom filter variants

Updated 9 months ago

nthash • Science 44%

Fast hash function for DNA/RNA sequences

Scientific Software
Updated 9 months ago

btllib — Peer-reviewed • Science 98%

btllib: A C++ library with Python interface for efficient genomic sequence processing - Published in JOSS (2022)

Updated 9 months ago

https://github.com/crowdstrike/apbf • Science 23%

Go package implementing Age-Partitioned Bloom Filters (APBF)