graphsim — Peer-reviewed • Rank 14.3 • Science 98%

graphsim: An R package for simulating gene expression data from graph structures of biological pathways - Published in JOSS (2020)

BGmisc — Peer-reviewed • Rank 11.2 • Science 100%

BGmisc: An R Package for Extended Behavior Genetics Analysis - Published in JOSS (2024)

MiscMetabar — Peer-reviewed • Rank 10.8 • Science 98%

MiscMetabar: an R package to facilitate visualization and reproducibility in metabarcoding analysis - Published in JOSS (2023)

omni-fig — Peer-reviewed • Rank 9.2 • Science 95%

omni-fig: Unleashing Project Configuration and Organization in Python - Published in JOSS (2024)

HiPart — Peer-reviewed • Rank 10.8 • Science 93%

HiPart: Hierarchical Divisive Clustering Toolbox - Published in JOSS (2023)

FuzzyClass — Peer-reviewed • Rank 6.6 • Science 93%

FuzzyClass: A family of Fuzzy and Non-Fuzzy probabilistic-based classifiers - Published in JOSS (2023)

tbeptools — Peer-reviewed • Rank 4.4 • Science 95%

tbeptools: An R package for synthesizing estuarine data for environmental research - Published in JOSS (2021)

coder — Peer-reviewed • Rank 6.2 • Science 93%

coder: An R package for code-based item classification and categorization - Published in JOSS (2020)

getTBinR — Peer-reviewed • Rank 5.1 • Science 93%

getTBinR: an R package for accessing and summarising the World Health Organisation Tuberculosis data - Published in JOSS (2019)

mxnorm — Peer-reviewed • Rank 2.1 • Science 95%

mxnorm: An R Package to Normalize Multiplexed Imaging Data - Published in JOSS (2022)

Overlapping — Peer-reviewed • Rank 3.7 • Science 93%

Overlapping: a R package for Estimating Overlapping in Empirical Distributions - Published in JOSS (2018)

andes • Rank 16.6 • Science 77%

Python toolbox / library for power system transient dynamics simulation with symbolic modeling and numerical analysis 🔥

biorad • Rank 7.6 • Science 77%

R package for analysis and visualisation of biological signals in weather radar data

ltbams • Rank 10.3 • Science 67%

Power system generation scheduling and co-simulation with dynamics.

aexpy • Rank 10.3 • Science 67%

AexPy /eikspai/ is Api EXplorer in PYthon for detecting API breaking changes in Python packages.

pfb-toolkit • Rank 6.4 • Science 67%

A python package to build portable Energy Management and Information Systems (EMIS) application in buildings.

nLTT • Rank 14.0 • Science 59%

Repository for the R nLTT package

changepoint • Rank 19.0 • Science 54%

A place for the development version of the changepoint package on CRAN.

rascal • Rank 5.8 • Science 67%

Python package to reconstruct and extend observational climate series through empricial downscaling of large-scale models

chess_bead • Rank 4.5 • Science 67%

Package for the both chess and Chinese poetry game. Inspired by Das Glasperlenspiel by Hermann Hesse.

taxotools • Rank 10.3 • Science 59%

Tools to Handle Taxonomic Lists

pkglite • Rank 11.9 • Science 57%

Compact Package Representations

BaseSet • Rank 10.4 • Science 57%

Provides classes for working with sets

https://github.com/cdcgov/pyrenew • Rank 6.7 • Science 59%

Python package for multi-signal Bayesian renewal modeling with JAX and NumPyro.

https://github.com/chris-prener/testdriver • Rank 6.7 • Science 59%

R package with data for teaching Statistics and Data Science

usethis • Rank 29.7 • Science 36%

Set up commonly used 📦 components

pkgdown • Rank 29.4 • Science 36%

Generate static html documentation for an R package

@stdlib/utils-library-manifest • Rank 20.0 • Science 44%

Load a manifest for compiling source files.

gismo • Rank 9.2 • Science 54%

GISMO is a NLP tool to rank and organize a corpus of documents according to a query.

pydov • Rank 14.1 • Science 49%

Python package to retrieve data from Databank Ondergrond Vlaanderen (DOV)

spectral-recovery • Rank 8.6 • Science 54%

Spectral recovery analysis for forested ecosystems in Python. Part of the PEOPLE-ER project.

golibs • Rank 7.9 • Science 54%

general purpose Golang code (to be included in other projects)

pyscaffold • Rank 25.8 • Science 36%

🛠 Python project template generator with batteries included

funbiogeo • Rank 4.4 • Science 57%

:package: R package to streamline functional biogeography workflows and provide publication-ready plots

vioplot • Rank 17.4 • Science 44%

Development version of vioplot R package (CRAN maintainer)

https://github.com/canonical/vanilla-framework • Rank 22.8 • Science 36%

From community websites to web applications, this CSS framework will help you achieve a consistent look and feel.

openair • Rank 20.6 • Science 36%

🧭 Open source tools for air quality data analysis

wqtrends • Rank 7.5 • Science 49%

R package to assess water quality trends with generalized additive models

n2kanalysis • Rank 2.3 • Science 54%

https://github.com/electron/forge • Rank 30.3 • Science 26%

:electron: A complete tool for building and publishing Electron applications

particula • Rank 11.9 • Science 44%

Particula is an open-source, Python-based aerosol simulator. Particula captures gas-particle interactions, transformations, and dynamics to power predictive aerosol science.

aniemore • Rank 11.4 • Science 44%

Emotions recognition from audio and text files (only russian language)

pywaterinfo • Rank 11.3 • Science 44%

Python package to download time series data from waterinfo.be

rcompendium • Rank 11.1 • Science 44%

:package: Create a package or compendium structure

R.oo • Rank 19.1 • Science 36%

R package: R.oo - R Object-Oriented Programming with or without References

watina • Rank 3.7 • Science 49%

R package for querying & processing data from the INBO Watina database (groundwater data)

@stdlib/error-tools-pkg2id • Rank 8.3 • Science 44%

Return the error identifier prefix associated with a specified package name.

OBIC • Rank 15.3 • Science 36%

An R package containing the functions for the Open Bodem Index (OBI)

namespace-alias2pkg • Rank 7.1 • Science 44%

Return the package name associated with a specified alias.

https://github.com/futureverse/future.apply • Rank 24.4 • Science 26%

:rocket: R package: future.apply - Apply Function to Elements in Parallel using Futures

biometryassist • Rank 14.3 • Science 36%

A package to aid in teaching experimental design and analysis through easy access and documentation of helper functions. Renaming of previous BiometryTraining package.

PSCBS • Rank 13.9 • Science 36%

🔬 R package: Analysis of Parent-Specific DNA Copy Numbers

@stdlib/namespace-standalone2pkg • Rank 5.8 • Science 44%

Return the internal package name associated with a provided standalone package name.

paleobuddy • Rank 13.7 • Science 36%

paleobuddy: an R package for simulating diversification dynamics, fossil records and phylogenies in R.

@stdlib/namespace-pkg2alias • Rank 5.4 • Science 44%

Return the alias associated with a specified package name.

vulpes • Rank 5.2 • Science 44%

Vulpes: Test many classification, regression models and clustering algorithms to see which one is most suitable for your dataset

@stdlib/namespace-alias2standalone • Rank 4.7 • Science 44%

Return the standalone package name associated with a specified alias.

worldmet • Rank 12.7 • Science 36%

🍃 Open source tools to access NOAA Integrated Surface Database (ISD) surface meteorological observations

@stdlib/error-tools-id2pkg • Rank 4.5 • Science 44%

Return the package name associated with a specified error identifier prefix.

@stdlib/namespace-pkg2related • Rank 4.2 • Science 44%

Return package names related to a specified package name.

@stdlib/namespace-pkg2standalone • Rank 4.0 • Science 44%

Return the standalone package name associated with a provided internal package name.

@stdlib/namespace-alias2related • Rank 3.8 • Science 44%

Return aliases related to a specified alias.

stata-alluvial • Rank 2.9 • Science 44%

A Stata package for alluvial plots

polyglotr • Rank 10.9 • Science 36%

R package to translate text

reactR • Rank 20.8 • Science 26%

React for R

stata-spider • Rank 2.7 • Science 44%

spider: A Stata package for spider plots.

stata-sunburst • Rank 2.6 • Science 44%

A Stata package for sunburst plots

stata-circlebar • Rank 2.5 • Science 44%

A Stata package for circular polar bar graphs.

niche_vlaanderen • Rank 9.9 • Science 36%

Python package to run the NICHE Vlaanderen model

discord • Rank 8.7 • Science 36%

r package discord

dverse • Rank 8.6 • Science 36%

Document a Universe of Packages

https://github.com/r-hub/pkgsearch • Rank 17.7 • Science 26%

Search R packages on CRAN

doFuture • Rank 17.2 • Science 26%

:rocket: R package: doFuture - Use Foreach to Parallelize via Future Framework

qualmap • Rank 10.1 • Science 33%

R package for working with semi-structured qualitative GIS data

https://github.com/futureverse/future.batchtools • Rank 16.6 • Science 26%

:rocket: R package future.batchtools: A Future API for Parallel and Distributed Processing using batchtools

rcartocolor • Rank 16.6 • Science 26%

Implementation of the CARTOcolor palettes in R

roll • Rank 16.3 • Science 26%

Fast and efficient computation of rolling and expanding statistics for time-series data.

linl • Rank 16.3 • Science 26%

Linl Is Not Letter -- Markdown-based LaTeX Letter Template

openairmaps • Rank 5.9 • Science 36%

🗺️ Open source tools to create maps of air pollution data

https://github.com/av/harbor • Rank 15.5 • Science 26%

Effortlessly run LLM backends, APIs, frontends, and services with one command.

illuminaio • Rank 18.2 • Science 23%

🔬 R package: This is the Bioconductor devel version of the illuminaio package.

miceFast • Rank 14.2 • Science 26%

R enviroment - fast imputations :dragon:

https://github.com/cmgmyr/laravel-messenger • Rank 25.8 • Science 13%

Simple user messaging package for Laravel

volcano3d • Rank 15.7 • Science 23%

An R package to plot interactive three-way differential expression analysis

sendgridr • Rank 11.3 • Science 26%

Mail Sender Using SendGrid mail API

phylum-ci • Rank 10.6 • Science 26%

Python package for handling CI and other integrations

speakr • Rank 10.4 • Science 26%

speakr: A Wrapper for the Phonetic Software Praat

MassWateR • Rank 10.3 • Science 26%

R package for working with Massachusetts surface water quality data

matrixStats • Rank 23.2 • Science 13%

R package: Methods that Apply to Rows and Columns of Matrices (and to Vectors)

imgpalr • Rank 10.1 • Science 26%

R package for generating color palettes from arbitrary images.

CNVMetrics • Rank 12.8 • Science 23%

R Package to compare copy number variant (CNV) results from multiple samples/methods

aroma.affymetrix • Rank 12.5 • Science 23%

🔬 R package: Analysis of Large Affymetrix Microarray Data Sets

R.utils • Rank 21.0 • Science 13%

🔧 R package: R.utils (this is *not* the utils package that comes with R itself)

kist • Rank 7.4 • Science 26%

Package Pipeline Processor

phylosamp • Rank 10.1 • Science 23%

The R package 'phylosamp' implements novel tools that estimate the probability of transmission between two cases given phylogenetic linkage and sample size calculations for phylogenetic studies.

funcMapper • Rank 7.0 • Science 26%

R package designed to visualise all user-defined functions in a given R script, along with any other user-defined functions they depend on. This tool helps users understand how functions are interconnected within a codebase.

https://github.com/brianpugh/python-template • Rank 6.8 • Science 26%

Python project and library template for clean, reliable, open-source projects.

TopDom • Rank 9.6 • Science 23%

R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes

snakecase • Rank 19.5 • Science 13%

🐍🐍🐍 A systematic approach to parse strings and automate the conversion to snake_case, UpperCamelCase or any other case.

DNMF • Rank 8.6 • Science 23%

Discriminant Nonnegative Matrix Factorization