Projects

Updated 6 months ago

tifffile • Rank 26.3 • Science 49%

Read and write TIFF files.

format-reader image imagej life-sciences-image numpy ome-tiff python tiff whole-slide-imaging zarr

Updated 5 months ago

https://github.com/cgohlke/sdtfile • Rank 11.8 • Science 49%

Read Becker & Hickl SDT files.

fluorescence-lifetime-spectroscopy fluorescence-microscopy-imaging format-reader life-sciences-image photon-counting python

Updated 5 months ago

https://github.com/cgohlke/lfdfiles • Rank 11.5 • Science 49%

Laboratory for Fluorescence Dynamics (LFD) file formats.

file-format fluorescence-lifetime-spectroscopy fluorescence-microscopy-imaging format-reader life-sciences-image python

Updated 5 months ago

https://github.com/cgohlke/roifile • Rank 14.8 • Science 39%

Read and write ImageJ ROI format.

format-reader imagej python region-of-interest

Updated 5 months ago

https://github.com/cgohlke/ptufile • Rank 11.7 • Science 39%

Read and write PicoQuant PTU and related files.

flim fluorescence-lifetime-spectroscopy fluorescence-microscopy-imaging format-reader life-sciences-image photon-counting picoquant ptu python tttr

Updated 5 months ago

https://github.com/cgohlke/czifile • Rank 13.0 • Science 36%

Read Carl Zeiss image files (CZI).

format-reader image life-sciences-image python zeiss zeiss-czi-files

Updated 5 months ago

https://github.com/cgohlke/oiffile • Rank 10.5 • Science 36%

Read Olympus image files (OIF and OIB).

fluorescence-microscopy-imaging format-reader image life-sciences-image olympus python

Updated 5 months ago

https://github.com/cgohlke/vidsrc • Rank 7.2 • Science 36%

Video frameserver for NumPy.

format-reader python video windows

Updated 5 months ago

https://github.com/cgohlke/netpbmfile • Rank 10.6 • Science 26%

Read and write Netpbm files.

format-reader image netpbm python

Updated 5 months ago

https://github.com/cgohlke/fcsfiles • Rank 0.0 • Science 36%

Read fluorescence correlation spectroscopy (FCS) data files.

fluorescence-correlation format-reader python zeiss

Updated 5 months ago

https://github.com/cgohlke/liffile • Rank 9.2 • Science 26%

Read Leica image files (LIF, LOF, XLIF, XLCF, XLEF, and LIFEXT).

flim fluorescence-lifetime-spectroscopy fluorescence-microscopy-imaging format-reader image leica life-sciences-image python

Updated 5 months ago

https://github.com/cgohlke/psdtags • Rank 11.3 • Science 23%

Read and write layered TIFF ImageSourceData and ImageResources tags.

format-reader photoshop psd python tiff

Updated 5 months ago

https://github.com/cgohlke/qdafile • Rank 5.6 • Science 23%

Read and write QDA files.

format-reader python

ecosyste.ms

Data

Tools

Indexes

Applications

Experiments

Open Source Science

tifffile • Rank 26.3 • Science 49%

https://github.com/cgohlke/sdtfile • Rank 11.8 • Science 49%

https://github.com/cgohlke/lfdfiles • Rank 11.5 • Science 49%

https://github.com/cgohlke/roifile • Rank 14.8 • Science 39%

https://github.com/cgohlke/ptufile • Rank 11.7 • Science 39%

https://github.com/cgohlke/czifile • Rank 13.0 • Science 36%

https://github.com/cgohlke/oiffile • Rank 10.5 • Science 36%

https://github.com/cgohlke/vidsrc • Rank 7.2 • Science 36%

https://github.com/cgohlke/netpbmfile • Rank 10.6 • Science 26%

https://github.com/cgohlke/fcsfiles • Rank 0.0 • Science 36%

https://github.com/cgohlke/liffile • Rank 9.2 • Science 26%

https://github.com/cgohlke/psdtags • Rank 11.3 • Science 23%

https://github.com/cgohlke/qdafile • Rank 5.6 • Science 23%