Data

Tools

Indexes

Applications

Experiments

Open Source Science

Updated 6 months ago

viv • Rank 20.1 • Science 85%

Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.

Updated 6 months ago

vizarr • Rank 7.4 • Science 85%

A minimal Zarr image viewer based on Viv.

Updated 6 months ago

vitessce • Rank 21.2 • Science 67%

Vitessce is a visual integration tool for exploration of spatial single-cell experiments.

Updated 6 months ago

echopype • Rank 14.9 • Science 67%

Enabling interoperability and scalability in ocean sonar data analysis

Updated 6 months ago

gribscan • Rank 4.6 • Science 77%

Create indices for GRIB files and provide an xarray interface.

Updated 6 months ago

zarrs • Rank 19.4 • Science 54%

A Rust library for the Zarr storage format for multidimensional arrays and metadata

Updated 6 months ago

napari-ome-zarr • Rank 14.6 • Science 54%

A napari plugin for zarr backed OME-NGFF images

Updated 6 months ago

shardedstore • Rank 2.6 • Science 64%

Provides a sharded Zarr store

Updated 5 months ago

arco-era5 • Rank 8.3 • Science 49%

Recipes for reproducing Analysis-Ready & Cloud Optimized (ARCO) ERA5 datasets.

Updated 5 months ago

icechunk • Rank 21.3 • Science 36%

Open-source, cloud-native transactional tensor storage engine

Updated 5 months ago

mesogeos • Rank 5.1 • Science 49%

A multi-purpose dataset for data-driven wildfire modeling in the Mediterranean. Deep Learning models for wildfire modeling, e.g. danger forecasting, burned area prediction, etc

Updated 5 months ago

hagelslag • Rank 13.0 • Science 23%

Hagelslag supports segmentation and tracking of weather fields and scalable verification, including performance diagrams and reliability diagrams.

Updated 6 months ago

Rarr • Rank 5.1 • Science 26%

A simple native R reader for Zarr Arrays

Updated 6 months ago

zarrtraj • Science 62%

zarrtraj MDAKit for @MDAnalysis

Updated 5 months ago

deepicedrain • Science 23%

Mapping and monitoring deep subglacial water activity in Antarctica using remote sensing and machine learning, with ICESat-2!