Projects

Updated 11 months ago

lls-core • Rank 12.2 • Science 57%

Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for data from the Zeiss lattice lightsheet microscope.

deconvolution deskewing image-analysis-and-processing lattice lightsheet microscopy napari oblique-plane python zeiss

Updated 11 months ago

oct-converter • Rank 16.2 • Science 44%

Tools for extracting the raw optical coherence tomography (OCT) and fundus data from proprietary file formats.

biobank dicom e2e fda fundus heidelberg oct python topcon zeiss

Updated 11 months ago

https://github.com/cgohlke/czifile • Rank 13.0 • Science 36%

Read Carl Zeiss image files (CZI).

format-reader image life-sciences-image python zeiss zeiss-czi-files

Updated 11 months ago

https://github.com/cgohlke/fcsfiles • Rank 0.0 • Science 36%

Read fluorescence correlation spectroscopy (FCS) data files.

fluorescence-correlation format-reader python zeiss

ecosyste.ms

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Open Source Science

lls-core • Rank 12.2 • Science 57%

oct-converter • Rank 16.2 • Science 44%

https://github.com/cgohlke/czifile • Rank 13.0 • Science 36%

https://github.com/cgohlke/fcsfiles • Rank 0.0 • Science 36%