foliage • Rank 7.9 • Science 62%

Foliage is the FOLIo chAnGe Editor, a tool to do bulk changes in FOLIO using the network API.

cosipy • Rank 10.9 • Science 59%

Coupled snowpack and ice surface energy and mass balance model in Python

DataDeps • Rank 15.9 • Science 54%

reproducible data setup for reproducible science

atmorep • Rank 5.9 • Science 64%

AtmoRep model code

tethys-platform • Rank 15.9 • Science 54%

The Tethys Platform main Django website project repository.

torchdynamo • Rank 15.9 • Science 54%

A Python-level JIT compiler designed to make unmodified PyTorch programs faster.

df3d • Rank 12.9 • Science 57%

Motion capture (markerless 3D pose estimation) pipeline and helper GUI for tethered Drosophila.

raer • Rank 12.9 • Science 57%

Characterize A-to-I RNA editing in bulk and single-cell RNA sequencing experiments

blueprints • Rank 5.9 • Science 64%

Software development blueprints for epiverse-trace

enhancing_reaxff_dft_database • Rank 2.9 • Science 67%

Database used for retraining the ReaxFF force field for the inorganic compound LiF.

Enlsip.jl — Peer-reviewed • Rank 2.9 • Science 67%

Enlsip.jl: A Julia optimization package to solve constrained nonlinear least-squares problems - Published in JOSS (2024)

NarmViz • Rank 2.9 • Science 67%

Visualize time series numerical association rules

cato • Rank 2.9 • Science 67%

Automatic source transformation to apply HPC frameworks with minimal user interaction

mips • Rank 2.9 • Science 67%

MIPS – MATPOWER Interior Point Solver for nonlinear optimization problems.

radseq • Rank 2.9 • Science 67%

Variant-calling pipeline for Restriction site-associated DNA sequencing (RADseq).

portfoliochoiceblogpost • Rank 2.9 • Science 67%

https://github.com/insarlab/mintpy • Rank 10.9 • Science 59%

Miami InSAR time-series software in Python

archaeophases • Rank 10.9 • Science 59%

Post-processing MCMC Simulations for Chronological Modelling

https://github.com/bin-cao/bgolearn • Rank 10.9 • Science 59%

[Materials & Design 2024 | NPJ com mat 2024] Offical implement of Bgolearn

monetio • Rank 7.9 • Science 62%

The Model and ObservatioN Evaluation Tool I/O package

api_nodetest • Rank 5.9 • Science 64%

node.js and express implementation for the Neotoma API

davos • Rank 5.9 • Science 64%

Import packages in Python, even if they aren't installed!

saintbioutils • Rank 5.9 • Science 64%

Repository of utility and miscellaneous functions for using in bioinformatics pipelines, primarily in Python

tooth-detection-and-numbering • Rank 5.8 • Science 64%

T.C. Maltepe University Graduate Project (Tooth Detection and Numbering From Panoramic Radiography Adult Patients Using Artificial Neural Network)

tximport • Rank 20.8 • Science 49%

Transcript quantification import for modular pipelines

matlab-novice • Rank 7.8 • Science 62%

Programming with MATLAB

simona • Rank 7.8 • Science 62%

simona is an agent-based discrete-event power system simulation model developed @ie3-institute

stable-diffusion-webui-forge • Rank 15.8 • Science 54%

nico_tutorial • Rank 2.8 • Science 67%

A package that performs cell type annotations on single cell resolution of spatial transcriptomics data, find the niche interactions and statistically enriched covariation of gene programs between interacting cell types from the neighborhood.

kannada-transliterate • Rank 2.8 • Science 67%

Transliterator between ಕನ್ನಡ (kannaḍa) and Latin script based on IAST & ISO 15919

ckanext-versioned-tiledmap • Rank 7.8 • Science 62%

A CKAN extension with a map view for versioned-datastore backed resources.

ckanext-userdatasets • Rank 7.8 • Science 62%

A CKAN extension that allows organisation members to create datasets, and edit or delete the datasets they have created.

mxnet.sharp • Rank 15.8 • Science 54%

.NET Standard bindings for Apache MxNet with Imperative, Symbolic and Gluon Interface for developing, training and deploying Machine Learning models in C#. https://mxnet.tech-quantum.com/

circuitscape.jl • Rank 12.8 • Science 57%

Algorithms from circuit theory to predict connectivity in heterogeneous landscapes

pysiral • Rank 5.8 • Science 64%

python package for scientific computing (satellite radar altimetry over ice-covered ocean)

l2hmc-qcd • Rank 5.8 • Science 64%

Application of the L2HMC algorithm to simulations in lattice QCD.

xtb • Rank 12.8 • Science 57%

Semiempirical Extended Tight-Binding Program Package

ocr-fileformat • Rank 7.8 • Science 62%

Validate and transform various OCR file formats (hOCR, ALTO, PAGE, FineReader)

ika-rwth-aachen/docker-ros • Rank 7.8 • Science 62%

docker-ros automatically builds development and deployment Docker images for your ROS-based repositories

RelevancePropagation • Rank 2.8 • Science 67%

Layerwise Relevance Propagation in Julia.

csvconf2023 • Rank 2.8 • Science 67%

Slides and resources from my CSV Conf 2023 keynote

nlesc-serverless-boilerplate • Rank 2.8 • Science 67%

An AWS amplify boilerplate web application

polydeal • Rank 2.8 • Science 67%

C++ implementation of Polygonal Discontinuous Galerkin method within the deal.II Finite Element library.

mpiwrapper • Rank 2.8 • Science 67%

A wrapper for MPI libraries, implementing an MPI ABI

lmlcr • Rank 2.8 • Science 67%

Lightweight Machine Learning Classics with R (Book Draft)

regressors-regressions-dataset • Rank 2.8 • Science 67%

Dataset of bug-introducing and bug-fixing commit sets from Mozilla's Bugzilla

solutions_calculator • Rank 2.8 • Science 67%

Interactive solutions calculator built with Shiny and R that allows users to compute mass, volume, or molarity based on combinations of those variables. The app automatically retrieves the compound’s molecular weight from the PubChem database using the webchem package.

long-term-validation-of-inner-urban-mobility-metrics-derived-from-twitter • Rank 2.8 • Science 67%

Long-term validation of inner-urban mobility metrics derived from Twitter

lubm4obda • Rank 2.8 • Science 67%

Inference and Meta Knowledge Benchmarking of OBDA Systems

bingclaw_5.6.1 • Rank 2.8 • Science 67%

BingClaw software for simulating landslide dynamics (requires ClawPACK version 5.6.1)

medea • Rank 2.8 • Science 67%

Meteorology Dependent Emission Algorithms

pybaselines • Rank 15.8 • Science 54%

A Python library of algorithms for the baseline correction of experimental data.

nlp-progress • Rank 15.8 • Science 54%

Repository to track the progress in Natural Language Processing (NLP), including the datasets and the current state-of-the-art for the most common NLP tasks.

emsarray • Rank 7.8 • Science 62%

xarray extension that supports EMS model formats

ctaplot • Rank 10.7 • Science 59%

Plotting library for CTA and other IACT

https://github.com/agnostiqhq/covalent • Rank 20.7 • Science 49%

Pythonic tool for orchestrating machine-learning/high performance/quantum-computing workflows in heterogeneous compute environments.

NURBS • Rank 5.7 • Science 64%

This package provides functionality to define and evaluate B-spline and NURBS (non-uniform rational B-spline) basis functions, their derivatives, as well as curves and surfaces based on both considered basis functions.

paleomix • Rank 10.7 • Science 59%

Pipelines and tools for the processing of ancient and modern HTS data.

pynaco • Rank 7.7 • Science 62%

Python Implementation of NACO Normalization Rules

sars-cov-2-pcr-testungen_in_deutschland • Rank 2.7 • Science 67%

Im Rahmen der Bewältigung der COVID-19-Pandemie spielt die Diagnostik hinsichtlich SARS-CoV-2/COVID-19 eine entscheidende Rolle. Die Bedeutung liegt nicht nur in der diagnostischen Abklärung, sondern hat eine herausragende Stellung auch für die Beurteilung der epidemiologischen Entwicklung und hinsichtlich Strategien zur Verlangsamung des aktuellen Geschehens in Deutschland. Die Erfassung der durchgeführten PCR-Tests sowie die Ermittlung des Anteils der SARS-CoV-2 positiven PCR-Tests ermöglichen eine Einschätzung zur Wirksamkeit der Maßnahmen und der Umsetzung der Teststrategie. Vor diesem Hintergrund werden im Datensatz an das RKI übermittelte Daten zu PCR-Testungen, PCR-Testergebnissen und Testkapazitäten in Deutschland als offene Daten bereitgestellt.

eco3d • Rank 2.7 • Science 67%

ECO3D: A three-dimensional land surface model

daten_der_notaufnahmesurveillance • Rank 2.7 • Science 67%

Der Datensatz 'Notaufnahmesurveillance' enthält aggregierte Daten der Routinedokumentation aus einer Auswahl deutscher Notaufnahmen aus dem AKTIN-Notaufnahmeregister und bildet die Grundlage für die Notaufnahmesurveillance am RKI.

euryale • Rank 2.7 • Science 67%

A pipeline for taxonomic classification and functional annotation of metagenomic reads. Based on MEDUSA

julia-on-fugaku • Rank 2.7 • Science 67%

https://github.com/bluebrain/morphology-suite • Rank 2.7 • Science 67%

https://github.com/bluebrain/opendata • Rank 2.7 • Science 67%

geolocator-dp • Rank 2.7 • Science 67%

GeoLocator Data Package: data exchange format for geolocator data.

metatag • Rank 2.7 • Science 67%

metaTag: functional and taxonomical annotation of metagenomes through phylogenetic tree placement

pachash • Rank 2.7 • Science 67%

Packed and Compressed Hash Tables

bayes • Rank 2.7 • Science 67%

A simple implementation of Naive Bayesian classifier

scikit-surgerytf • Rank 2.7 • Science 67%

Examples for running surgical segmentations using Tensor Flow

eulerr • Rank 15.7 • Science 54%

Area-Proportional Euler and Venn Diagrams with Ellipses

climaemet • Rank 12.7 • Science 57%

R Climate AEMET Tools

snotelr • Rank 10.7 • Science 59%

a snow data network (SNOTEL) R package

discregrid • Rank 7.7 • Science 62%

A static C++ library for the generation of discrete functions on a box-shaped domain. This is especially suited for the discretization of signed distance fields.

soxspipe • Rank 10.7 • Science 59%

The pipeline for the SOXS instrument

libtmux • Rank 25.7 • Science 44%

⚙️ Python API / wrapper for tmux

https://github.com/alan-turing-institute/trustchain • Rank 15.7 • Science 54%

Trustworthy decentralised PKI

viztracer • Rank 25.6 • Science 44%

A debugging and profiling tool that can trace and visualize python code execution

trexio • Rank 15.6 • Science 54%

TREX I/O library

viridis • Rank 23.6 • Science 46%

Colorblind-Friendly Color Maps for R

hypertext2019 • Rank 2.6 • Science 67%

Paper and poster to revive the original idea of hypertext based on transclusion

climate_community_crossrealm • Rank 2.6 • Science 67%

Comparisons of community responses to temperature change across realms

anonymize-ddp • Rank 2.6 • Science 67%

corona-datenspende_teildatensatz_vitaldaten • Rank 2.6 • Science 67%

Die Daten von Fitnessarmbändern und SmartwatchesDie Daten von Fitnessarmbändern und Smartwatches, sogenannten Wearables, können Hinweise auf Symptome einer COVID-19 Erkrankung liefern. Mit Hilfe der Corona-Datenspende-App (CDA) konnten Bürger:innen dem Robert Koch-Institut solche Daten für wissenschaftliche Zwecke zur Verfügung stellen.

paper_sartore_2022_humanoids_ergonomic_design • Rank 2.6 • Science 67%

Humanoids 2022 Paper

@stdlib/math-base-ops-cdiv • Rank 2.6 • Science 67%

Divide two complex numbers.

shinyresults • Rank 2.6 • Science 67%

R package with shiny modules and apps to analyze model results

hcestimator.jl • Rank 2.6 • Science 67%

This library provides a Distributed Energy Resources' Hosting Capacity estimation of distribution systems considering that the Distribution Company can partially dispatch other DERs installed in the system.

zigguratgaussian • Rank 2.6 • Science 67%

Fast Gaussian distributed pseudorandom number generation in Java via the Ziggurat algorithm

nemo-aligner • Rank 15.6 • Science 54%

Scalable toolkit for efficient model alignment

reductstore • Rank 17.6 • Science 52%

High Performance Storage and Streaming Solution for Data Acquisition Systems

snorkel • Rank 23.6 • Science 46%

A system for quickly generating training data with weak supervision

workflowr • Rank 20.6 • Science 49%

Organize your project into a research website

omamer • Rank 10.6 • Science 59%

OMAmer - tree-driven and alignment-free protein assignment to sub-families

code-bert-score • Rank 15.6 • Science 54%

CodeBERTScore: an automatic metric for code generation, based on BERTScore

lfa • Rank 15.6 • Science 54%

logistic factor analysis

https://github.com/ourownstory/neural_prophet • Rank 23.6 • Science 46%

NeuralProphet: A simple forecasting package

grad-cam • Rank 23.6 • Science 46%

Advanced AI Explainability for computer vision. Support for CNNs, Vision Transformers, Classification, Object detection, Segmentation, Image similarity and more.

sport-activities-features • Rank 12.6 • Science 57%

A minimalistic toolbox for extracting features from sports activity files written in Python