GitHub
ultralystics-baseline
Based on the official Ultralytics repository, I've added some of my own tricks to serve as a baseline for various comparative experiments in object detection.
intro-tableau
An introductory lesson on data visualization using Tableau Public. Learners create charts, explore datasets, and build dashboards—no prior experience required.
stochasticvehiclescheduling.jl
Application of InferOpt.jl to the Stochastic Vehicle Scheduling Problem
mumu
C++ implementation of lulu, a R package for post-clustering curation of metabarcoding data
evexplorer
nf-core/evexplorer is a pipeline for analyzing RNA data from extracellular vesicles, compatible with technologies such as nextflex, comboSeq, and ONT with further support forthcoming. evexplorer handles QC, expressed region detection, library size normalization and Differential RNA Expression (DRE)
macchiato
Macchiato is a Petri Nets implementation for Python 3 with a focus of usability and scriptability.
fair_genome_indexer
Download and index Ensembl sequences and annotations, remove non-canonical chromosimes, remove low TSL, index with multiple tools
VSMOD: A Vessel Segmentation and MODelization plugin for 3D Slicer
VSMOD: A Vessel Segmentation and MODelization plugin for 3D Slicer - Published in JOSS (2025)
mlflow-cnn
Galaxy Redshift Estimation Using Convolutional Neural Networks with MLflow Tracking
awesome-arm-in-smart-agriculture
A collection of literature on the use of association rule mining methods in smart agriculture
ai-attendance-system
An AI-powered attendance system using YOLOv5 for face detection and recognition.
sixarm_ruby_sentry
SixArm.com » Ruby » Sentry simple monitorning of URI links, DNS names, etc.
stars-reproduce-johnson-2021
Assessing the computational reproducibility of Johnson et al. 2021 as part of STARS.
daedalus
[UNDER DEVELOPMENT] R package implementing the DAEDALUS model for projecting and optimising health, social, and economic costs of a pandemic.
wneq
wneq is a Python package for computing nuclear equilibria in nucleosynthesis.
sparsematrixcolorings.jl
Coloring algorithms for sparse Jacobian and Hessian matrices
best-practice-documentation
The best-practice documentation of SDSC (mirror from Gitlab)
CloudCovErr
Pipeline for debiasing and improving error bar estimates for photometry on top of structured/filamentary background.
stats-strided-dsvariance
Calculate the variance of a single-precision floating-point strided array using extended accumulation and returning an extended precision result.
metagenomics-analysis-workbench
Preview of carpentries-lab/metagenomics-analysis transitioned to use the Workbench
1.5mhzllcbandwidthlimit
Finding the Control Bandwidth Limit of a 1.5 MHz LLC Converter
citation-decoder
: An AI-powered tool that extracts citations from research papers and explains their context, purpose, and relationship to the main paper. Built with PyMuPDF for PDF parsing, OpenAI GPT-4 for citation analysis, and Streamlit for the web interface.
nagios-plugin-ruby-templates
A set of templates for Nagios check scripts written in Ruby.
fast-llm
Accelerating your LLM training to full speed! Made with ❤️ by ServiceNow Research
lang-est-x-plamk
Finite state and Constraint Grammar based analysers and proofing tools, and language resources for the Estonian language
open-in-mpv
Host-side of the extension to open any link or page URL in mpv via the browser context menu.
locor
Locor is a generic multimodal image registration tool based on modeling local functional dependence with linear combination of learned basis functions.
constants-float64-max-nth-factorial
Maximum nth factorial when stored in double-precision floating-point format.
pynxtools-mpes
A plugin to convert multi photoelectron spectroscopy files into the NXmpes application definition
tsimcne
Unsupervised visualization of image datasets using contrastive learning
deliberate-lab
Platform for running online research experiments on human + LLM group dynamics.
mapping-taxonomists
TETTRIs WP3, task 3.2: automatic mapping of taxonomic expertise
image-st
A pipeline to generate count matrix for different spatial technologies. ISS/MERFISH-like data are decoded using PoSTcode
regressor
Regressing how many citations a given paper will have based on its abstract, title, year
https://github.com/aravind-j/dormancymetrics
Curve Fitting for Seed Dormancy Release
https://github.com/caltechlibrary/flatlaketools
flatlakeTools is a prototype for making use of the content generate by CloudCannon's FlatLake
https://github.com/caltechlibrary/codemeta-pandoc-examples
This repository describes how to generate a CITATION.cff, about.md and installer.sh from a codemeta.json file using Pandoc.
or-gerrymander-alabama
PRactice open research by studying gerrymandering in Alabama
https://github.com/caltechlibrary/csvtextarea
A Web Component for working with tabular data, migrated to CL-web-components.
unstructured-grid-viz-cookbook
Cookbook showcasing workflows & techniques for visualizing unstructured grids using the UXarray python package
https://github.com/danielvartan/sqlr
🔍 System for Systematic Quantitative Literature Eeviews
fim
An automated tool for characterizing nonlinear, anisotropic soft materials via confocal image-based indentation and inverse modeling
https://github.com/digital-porous-media/dpm_tools
A set of tools to process and analyze digital porous media
bibsnet
This BIDS App provides the utility of creating a nnU-Net anatomical MRI segmentation and mask with a infant brain trained model. It can easily be included in other processing pipelines and for circumventing JLF within Nibabies.
structuretoolkit
build, analyse and visualise atomistic structures for materials science
mddatasetbuilder
A script to build reference datasets for training neural network potentials from given LAMMPS trajectories.
lang-pur
Finite state and Constraint Grammar based analysers and proofing tools, and language resources for the Purubora language
training-ngiab-101
This repository will be used for preparing training module for NGIAB